RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 ZNF423Q2M1K9 1284 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 PLA2G4EQ3MJ16 856 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 ZNF484Q5JVG2 852 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 FAM160B1Q5W0V3 765 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 SWSAP1Q6NVH7 229 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 MIS18BP1Q6P0N0 1132 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 DARS2Q6PI48 645 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 SYCE2Q6PIF2 218 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 CCDC149Q6ZUS6 474 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 TRMT1LQ7Z2T5 733 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 HDXQ7Z353 690 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 KRT25Q7Z3Z0 450 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 ZNF598Q86UK7 904 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 PPFIBP1Q86W92 1011 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 KRT78Q8N1N4 520 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 FAM26EQ8N5C1 309 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 OR2C3Q8N628 320 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 MYCT1Q8N699 235 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 CLRN3Q8NCR9 226 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 FRS2Q8WU20 508 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 BCL7CQ8WUZ0 217 aaPredicted RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 RSPH1Q8WYR4 309 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 HDAC2Q92769 488 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 DIO2Q92813 273 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 HPS3Q969F9 1004 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 CCDC140Q96MF4 163 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 JAKMIP1Q96N16 626 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 CASD1Q96PB1 797 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 TBCBQ99426 244 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 POP1Q99575 1024 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 ZCCHC2Q9C0B9 1178 aaKnown RBP5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 GBP3Q9H0R5 595 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 TMEM60Q9H2L4 133 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 ADAMTS10Q9H324 1103 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 CRISPLD1Q9H336 500 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 TMEM161AQ9NX61 479 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 APEX2Q9UBZ4 518 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 FBXO10Q9UK96 956 aa5.33□□□□□ -1.56
GAPLINC-202ENST00000579007 GVINP1Q7Z2Y8 2422 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 DENND3A2RUS2 1198 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 WDR64B1ANS9 1081 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 H3BRJ5 948 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 AREL1O15033 823 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 XPOTO43592 962 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 CHMP2AO43633 222 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 NCK2O43639 380 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC37A4O43826 429 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 DTNBO60941 627 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 CSDE1O75534 798 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 MTA2O94776 668 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 STBD1O95210 358 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 CD2BP2O95400 341 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 LAG3P18627 525 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SP100P23497 879 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 MSX1P28360 303 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TSPAN7P41732 249 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 RAD52P43351 418 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 MRE11P49959 708 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 KPNA1P52294 538 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 CRYBB1P53674 252 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 VCPP55072 806 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ZBED6P86452 979 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 UBE3AQ05086 875 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TCF15Q12870 199 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TOB2Q14106 344 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 KRT32Q14532 448 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TARBP2Q15633 366 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 POMZP3Q6PJE2 187 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SYNE3Q6ZMZ3 975 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC24A5Q71RS6 500 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 CENPQQ7L2Z9 268 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ALYREFQ86V81 257 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 PTRH1Q86Y79 214 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ECHDC2Q86YB7 292 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TRIM59Q8IWR1 403 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 THNSL1Q8IYQ7 743 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC39A11Q8N1S5 342 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 LRRC43Q8N309 656 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ZBTB34Q8NCN2 500 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ETNPPLQ8TBG4 499 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC5A5Q92911 643 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 USP13Q92995 863 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SECISBP2LQ93073 1101 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ASIC4Q96FT7 647 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 RCC1LQ96I51 464 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TEKT5Q96M29 485 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 RIPOR3Q96MK2 946 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 ACO2Q99798 780 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SH2D3AQ9BRG2 576 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 APOL5Q9BWW9 433 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 LSM14BQ9BX40 385 aaKnown RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 VN1R3Q9BXE9 311 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC26A6Q9BXS9 759 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 RNF26Q9BY78 433 aaPredicted RBP5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 TMEM117Q9H0C3 514 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 NUP62CLQ9H1M0 184 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 S1PR5Q9H228 398 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SMOC2Q9H3U7 446 aa5.32□□□□□ -1.56
GAPLINC-202ENST00000579007 SPTLC3Q9NUV7 552 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms