RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 FUBP3Q96I24 572 aaKnown RBP eCLIP19.97■□□□□ 0.79
PKD1-223ENST00000561668 SHDQ96IW2 340 aa19.97■□□□□ 0.79
PKD1-223ENST00000561668 LRRC3Q9BY71 257 aa19.97■□□□□ 0.79
PKD1-223ENST00000561668 METTL14Q9HCE5 456 aaKnown RBP19.97■□□□□ 0.79
PKD1-223ENST00000561668 TRIOO75962 3097 aa19.97■□□□□ 0.79
PKD1-223ENST00000561668 MYBPHLA2RUH7 354 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 A8MXQ7 604 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 PMM2O15305 246 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 CSH1P0DML2 217 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 CSH2P0DML3 217 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 ATF6P18850 670 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 ERCC5P28715 1186 aaPredicted RBP19.96■□□□□ 0.79
PKD1-223ENST00000561668 CLCN5P51795 746 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 CYP27A1Q02318 531 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 KLHL10Q6JEL2 608 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 FAM171BQ6P995 826 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 TMC8Q8IU68 726 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 SCN4BQ8IWT1 228 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 CCDC150Q8NCX0 1101 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 SHKBP1Q8TBC3 707 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 TAF4BQ92750 862 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 EEF2KMTQ96G04 330 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 ZSWIM3Q96MP5 696 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 ASB16Q96NS5 453 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 IMPG2Q9BZV3 1241 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 TMEM8AQ9HCN3 771 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 MAGED2Q9UNF1 606 aaPredicted RBP19.96■□□□□ 0.79
PKD1-223ENST00000561668 CTNND2Q9UQB3 1225 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 COQ4Q9Y3A0 265 aa19.96■□□□□ 0.79
PKD1-223ENST00000561668 ATP2C2O75185 946 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 MOSPD3O75425 235 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 GNA14O95837 355 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 PSMC1P62191 440 aaKnown RBP19.95■□□□□ 0.78
PKD1-223ENST00000561668 DDR2Q16832 855 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 DPCR1Q3MIW9 517 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 CFAP221Q4G0U5 840 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 SLC35C1Q96A29 364 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 FAM122AQ96E09 287 aa19.95■□□□□ 0.78
PKD1-223ENST00000561668 MRPL45Q9BRJ2 306 aaKnown RBP19.95■□□□□ 0.78
PKD1-223ENST00000561668 TRMT61BQ9BVS5 477 aaKnown RBP19.95■□□□□ 0.78
PKD1-223ENST00000561668 ARMCX3Q9UH62 379 aaPredicted RBP19.95■□□□□ 0.78
PKD1-223ENST00000561668 DPYSL4O14531 572 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 HCRTO43612 131 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 STX10O60499 249 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 ASS1P00966 412 aaKnown RBP19.94■□□□□ 0.78
PKD1-223ENST00000561668 PTPN1P18031 435 aaKnown RBP19.94■□□□□ 0.78
PKD1-223ENST00000561668 TRIM21P19474 475 aaKnown RBP19.94■□□□□ 0.78
PKD1-223ENST00000561668 GRIK1P39086 918 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 PIK3CAP42336 1068 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 NUBP1P53384 320 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 CCDC183Q5T5S1 534 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 GPR158Q5T848 1215 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 VSTM1Q6UX27 236 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 GAREM2Q75VX8 874 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 YAF2Q8IY57 180 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 MYCBPAPQ8TBZ2 947 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 FAXDC2Q96IV6 333 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 PKMYT1Q99640 499 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 PLA2G2FQ9BZM2 168 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 BRD9Q9H8M2 597 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 ZNF334Q9HCZ1 680 aaPredicted RBP19.94■□□□□ 0.78
PKD1-223ENST00000561668 ARHGEF3Q9NR81 526 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 TMEM63CQ9P1W3 806 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 UXTQ9UBK9 157 aaPredicted RBP19.94■□□□□ 0.78
PKD1-223ENST00000561668 ZMYM5Q9UJ78 669 aa19.94■□□□□ 0.78
PKD1-223ENST00000561668 TRIM49P0CI25 452 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 TRIM49CP0CI26 452 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 PSMC3P17980 439 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 ANXA13P27216 316 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 MAGEA11P43364 429 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 GCLMP48507 274 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 VCPP55072 806 aaKnown RBP19.93■□□□□ 0.78
PKD1-223ENST00000561668 STX17P56962 302 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 SLC44A4Q53GD3 710 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 KRT39Q6A163 491 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 TRIM59Q8IWR1 403 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 TNIP3Q96KP6 325 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 SRRTQ9BXP5 876 aaKnown RBP19.93■□□□□ 0.78
PKD1-223ENST00000561668 DNAI2Q9GZS0 605 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 TASP1Q9H6P5 420 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 MMRN2Q9H8L6 949 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 TRPV4Q9HBA0 871 aa19.93■□□□□ 0.78
PKD1-223ENST00000561668 KRBA1A5PL33 1030 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 FGFR1OPO95684 399 aaKnown RBP19.92■□□□□ 0.78
PKD1-223ENST00000561668 HLA-DRAP01903 254 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 PTMSP20962 102 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 BDNFP23560 247 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 VIPR2P41587 438 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 CDH8P55286 799 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 KLHL40Q2TBA0 621 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 MDH1BQ5I0G3 518 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 IER5LQ5T953 404 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 SDHAF4Q5VUM1 108 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 IRF2BP1Q8IU81 584 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 ARID3BQ8IVW6 561 aaPredicted RBP19.92■□□□□ 0.78
PKD1-223ENST00000561668 MFSD6LQ8IWD5 586 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 DEPDC1BQ8WUY9 529 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 MRPS31Q92665 395 aaKnown RBP19.92■□□□□ 0.78
PKD1-223ENST00000561668 IRF7Q92985 503 aa19.92■□□□□ 0.78
PKD1-223ENST00000561668 MYLPFQ96A32 169 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms