RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 GABRDO14764 452 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 PDGFRBP09619 1106 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 ODC1P11926 461 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 CAPN2P17655 700 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 DESP17661 470 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 AARSP49588 968 aaKnown RBP eCLIP14.55□□□□□ -0.08
TPM1-215ENST00000558868 CLCNKBP51801 687 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 BST2Q10589 180 aaKnown RBP14.55□□□□□ -0.08
TPM1-215ENST00000558868 ACAP1Q15027 740 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 C8orf74Q6P047 294 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 WDR93Q6P2C0 686 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 DCLRE1AQ6PJP8 1040 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 CTU1Q7Z7A3 348 aaKnown RBP14.55□□□□□ -0.08
TPM1-215ENST00000558868 XYLT1Q86Y38 959 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 ZDHHC17Q8IUH5 632 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 NIPA2Q8N8Q9 360 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 C12orf29Q8N999 325 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 ANKRD52Q8NB46 1076 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 UBA3Q8TBC4 463 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 MAIP1Q8WWC4 291 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 RSPH1Q8WYR4 309 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 ALG3Q92685 438 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 MCRS1Q96EZ8 462 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 TOX2Q96NM4 488 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 MCEEQ96PE7 176 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 CPXM1Q96SM3 734 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 CRISPLD2Q9H0B8 497 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 RBM12Q9NTZ6 932 aaKnown RBP14.55□□□□□ -0.08
TPM1-215ENST00000558868 TMEM161AQ9NX61 479 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 CYTH4Q9UIA0 394 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 TMEM59LQ9UK28 342 aa14.55□□□□□ -0.08
TPM1-215ENST00000558868 CCDC151A5D8V7 595 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 CASTOR2A6NHX0 329 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 GOLGA8SH3BPF8 625 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 POMCP01189 267 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 FGGP02679 453 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 ERBB2P04626 1255 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 FGFR1P11362 822 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 PCSK1P29120 753 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 ACADSBP45954 432 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 PKDCCQ504Y2 493 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 PLEKHG4Q58EX7 1191 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 CYP4A22Q5TCH4 519 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 LRRC38Q5VT99 294 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 WSCD1Q658N2 575 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 SLC39A5Q6ZMH5 540 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 ANKRD33Q7Z3H0 272 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 RTN4RL1Q86UN2 441 aaPredicted RBP14.54□□□□□ -0.08
TPM1-215ENST00000558868 B3GALNT2Q8NCR0 500 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 KRT35Q92764 455 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 SLC4A5Q9BY07 1137 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 SLITRK6Q9H5Y7 841 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 ST7Q9NRC1 585 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 FAM49BQ9NUQ9 324 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 SMARCAL1Q9NZC9 954 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 EHD2Q9NZN4 543 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 MTUS1Q9ULD2 1270 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 INPP5FQ9Y2H2 1132 aa14.54□□□□□ -0.08
TPM1-215ENST00000558868 MKI67P46013 3256 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 HOXA2O43364 376 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 PQBP1O60828 265 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 MYCP01106 439 aaPredicted RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 PFKMP08237 780 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 PTPN1P18031 435 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 LMO2P25791 158 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 SCNN1AP37088 669 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 SSR1P43307 286 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 RNASE9P60153 205 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 PKN2Q16513 984 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 MAP9Q49MG5 647 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 DCAF12L1Q5VU92 463 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 C1orf53Q5VUE5 145 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 LLGL2Q6P1M3 1020 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 FBXO38Q6PIJ6 1188 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 FBXO46Q6PJ61 603 aaPredicted RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 TMEM110Q86TL2 294 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 OSTM1Q86WC4 334 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 TTC30AQ86WT1 665 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 ANKLE1Q8NAG6 615 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 CCDC26Q8TAB7 109 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 SLC35F5Q8WV83 523 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 HSFY1Q96LI6 401 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 RUNDC3BQ96NL0 473 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 HNRNPABQ99729 332 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 NCAPGQ9BPX3 1015 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 TRIM7Q9C029 511 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 DPEP3Q9H4B8 488 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 DDX56Q9NY93 547 aaKnown RBP14.53□□□□□ -0.08
TPM1-215ENST00000558868 CDH9Q9ULB4 789 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 NME7Q9Y5B8 376 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 PCDHB7Q9Y5E2 793 aa14.53□□□□□ -0.08
TPM1-215ENST00000558868 ENPP3O14638 875 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 NBNO60934 754 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 B3GAT3O94766 335 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 CYP11A1P05108 521 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 PSMA2P25787 234 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 ADORA2BP29275 332 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms