RNA–Protein interactions for RNA: ENST00000556939.5

PGF-207, Transcript of placental growth factor, humanhuman

TSL 2

Gene PGF, Length 1,125 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGF-207ENST00000556939 TRIM49P0CI25 452 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 TRIM49CP0CI26 452 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PSMC3P17980 439 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 RFX1P22670 979 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 BDNFP23560 247 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
PGF-207ENST00000556939 ATICP31939 592 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PRCPP42785 496 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 NLRP12P59046 1061 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 TNNC1P63316 161 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PFKPQ01813 784 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 TAF12Q16514 161 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 ZACNQ401N2 412 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 MDH1BQ5I0G3 518 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 SCARA5Q6ZMJ2 495 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 SV2AQ7L0J3 742 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 ALYREFQ86V81 257 aaKnown RBP17.8■□□□□ 0.44
PGF-207ENST00000556939 SCN4BQ8IWT1 228 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 CCDC105Q8IYK2 499 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 DTWD2Q8NBA8 298 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PJA1Q8NG27 643 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
PGF-207ENST00000556939 PCED1BQ96HM7 432 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 SNX25Q9H3E2 840 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 TASP1Q9H6P5 420 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 BRD9Q9H8M2 597 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 VRTNQ9H8Y1 702 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.8■□□□□ 0.44
PGF-207ENST00000556939 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 FRMD4BQ9Y2L6 1034 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PCDHA5Q9Y5H7 936 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PIEZO1Q92508 2521 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 COL4A2P08572 1712 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 PTPRDP23468 1912 aa17.8■□□□□ 0.44
PGF-207ENST00000556939 KANSL1LA0AUZ9 987 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 ARNTLO00327 626 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 NOL4O94818 638 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 KIF20AO95235 890 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 FGF19O95750 216 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 CSH1P0DML2 217 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 CSH2P0DML3 217 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 CDC25CP30307 473 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 VAMP7P51809 220 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 NUBP1P53384 320 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 AP3M2P53677 418 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 CACNA2D1P54289 1103 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 PRKCQQ04759 706 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 PPP3CAQ08209 521 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 SPOPLQ6IQ16 392 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 TPRG1Q6ZUI0 275 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 SPATA20Q8TB22 786 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 MYCBPAPQ8TBZ2 947 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 FUBP3Q96I24 572 aaKnown RBP eCLIP17.79■□□□□ 0.44
PGF-207ENST00000556939 MAGEC2Q9UBF1 373 aaPredicted RBP17.79■□□□□ 0.44
PGF-207ENST00000556939 SIT1Q9Y3P8 196 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 OBSL1O75147 1896 aa17.79■□□□□ 0.44
PGF-207ENST00000556939 GREB1Q4ZG55 1949 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 TICRRQ7Z2Z1 1910 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 NUP210Q8TEM1 1887 aaPredicted RBP17.78■□□□□ 0.44
PGF-207ENST00000556939 CLDN5O00501 218 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 MAPK13O15264 365 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 HLA-DRAP01903 254 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
PGF-207ENST00000556939 MAGEA11P43364 429 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 PMS1P54277 932 aaKnown RBP17.78■□□□□ 0.44
PGF-207ENST00000556939 RPL10AP62906 217 aaKnown RBP17.78■□□□□ 0.44
PGF-207ENST00000556939 CYP27A1Q02318 531 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 ADAM9Q13443 819 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 ARHGAP15Q53QZ3 475 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 TXNDC8Q6A555 127 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 FAM186BQ8IYM0 893 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 RIN3Q8TB24 985 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 DEPDC1BQ8WUY9 529 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 ATOH1Q92858 354 aaPredicted RBP17.78■□□□□ 0.44
PGF-207ENST00000556939 SHDQ96IW2 340 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 ZFYVE19Q96K21 471 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 LTB4R2Q9NPC1 389 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 CACNA1IQ9P0X4 2223 aa17.78■□□□□ 0.44
PGF-207ENST00000556939 FAM170BA6NMN3 283 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 A8MXQ7 604 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 IKBKBO14920 756 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 ZNF263O14978 683 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 TARSP26639 723 aaKnown RBP17.77■□□□□ 0.44
PGF-207ENST00000556939 GCLMP48507 274 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 USP46P62068 366 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 UBXN2BQ14CS0 331 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 ZNF667Q5HYK9 610 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
PGF-207ENST00000556939 ISM2Q6H9L7 571 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 C4orf50Q6ZRC1 276 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 MAB21L3Q8N8X9 362 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 DNASE1L2Q92874 299 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 MYRFLQ96LU7 910 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 TIGD1Q96MW7 591 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 B3GNT5Q9BYG0 378 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 ZNF518BQ9C0D4 1074 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 MMRN2Q9H8L6 949 aa17.77■□□□□ 0.44
PGF-207ENST00000556939 APOBEC3GQ9HC16 384 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms