RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 CNTNAP3BQ96NU0 1288 aa24.22■■□□□ 1.47
PABPN1-207ENST00000556821 MKNK1Q9BUB5 465 aa24.22■■□□□ 1.47
PABPN1-207ENST00000556821 CNTNAP3Q9BZ76 1288 aa24.22■■□□□ 1.47
PABPN1-207ENST00000556821 WNT16Q9UBV4 365 aa24.22■■□□□ 1.47
PABPN1-207ENST00000556821 CDH9Q9ULB4 789 aa24.22■■□□□ 1.47
PABPN1-207ENST00000556821 NCANO14594 1321 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 KRBA1A5PL33 1030 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 IKBKBO14920 756 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 ECI2O75521 394 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 CYP2F1P24903 491 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 RPL13P26373 211 aaKnown RBP24.21■■□□□ 1.47
PABPN1-207ENST00000556821 ANP32AP39687 249 aaKnown RBP24.21■■□□□ 1.47
PABPN1-207ENST00000556821 VAMP7P51809 220 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 TNNC1P63316 161 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 GPC5P78333 572 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 ADAM9Q13443 819 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 VEPH1Q14D04 833 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 ZNF699Q32M78 642 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 STXBP5Q5T5C0 1151 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 TANGO2Q6ICL3 276 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 FAM186BQ8IYM0 893 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 KIAA2013Q8IYS2 634 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 STKLD1Q8NE28 680 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 FAM200AQ8TCP9 573 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 GIPC2Q8TF65 315 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 NXF1Q9UBU9 619 aaKnown RBP24.21■■□□□ 1.47
PABPN1-207ENST00000556821 HOOK1Q9UJC3 728 aaKnown RBP24.21■■□□□ 1.47
PABPN1-207ENST00000556821 FBXL21Q9UKT6 434 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 WDR87Q6ZQQ6 2873 aa24.21■■□□□ 1.47
PABPN1-207ENST00000556821 EPG5Q9HCE0 2579 aa24.2■■□□□ 1.47
PABPN1-207ENST00000556821 PDGFRBP09619 1106 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 TRIM49P0CI25 452 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 TRIM49CP0CI26 452 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 HMGA1P17096 107 aaKnown RBP24.2■■□□□ 1.46
PABPN1-207ENST00000556821 GABRR2P28476 465 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 PMS1P54277 932 aaKnown RBP24.2■■□□□ 1.46
PABPN1-207ENST00000556821 MCCD1P59942 119 aaPredicted RBP24.2■■□□□ 1.46
PABPN1-207ENST00000556821 PPP3CAQ08209 521 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 CFAP221Q4G0U5 840 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 SDHAF4Q5VUM1 108 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 INTS8Q75QN2 995 aaKnown RBP24.2■■□□□ 1.46
PABPN1-207ENST00000556821 SIX5Q8N196 739 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 MYLPFQ96A32 169 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 EEF2KMTQ96G04 330 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 SMYD3Q9H7B4 428 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 MAN1B1Q9UKM7 699 aa24.2■■□□□ 1.46
PABPN1-207ENST00000556821 FAM163BP0C2L3 166 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 PSMC2P35998 433 aaKnown RBP24.19■■□□□ 1.46
PABPN1-207ENST00000556821 ENPEPQ07075 957 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 ZNF667Q5HYK9 610 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 SPATA2LQ8IUW3 424 aaPredicted RBP24.19■■□□□ 1.46
PABPN1-207ENST00000556821 ZC3H3Q8IXZ2 948 aaKnown RBP24.19■■□□□ 1.46
PABPN1-207ENST00000556821 ZSCAN18Q8TBC5 510 aaPredicted RBP24.19■■□□□ 1.46
PABPN1-207ENST00000556821 SMARCD2Q92925 531 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 ELSPBP1Q96BH3 223 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 FUBP3Q96I24 572 aaKnown RBP eCLIP24.19■■□□□ 1.46
PABPN1-207ENST00000556821 SDCBP2Q9H190 292 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 CA14Q9ULX7 337 aa24.19■■□□□ 1.46
PABPN1-207ENST00000556821 TRIM49BA6NDI0 452 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 ASS1P00966 412 aaKnown RBP24.18■■□□□ 1.46
PABPN1-207ENST00000556821 CD44P16070 742 aaKnown RBP24.18■■□□□ 1.46
PABPN1-207ENST00000556821 RAP1GAPP47736 663 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 DDR2Q16832 855 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 ISM2Q6H9L7 571 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 TMEM150AQ86TG1 271 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 OR6B3Q8NGW1 331 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 PCED1BQ96HM7 432 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 SNX25Q9H3E2 840 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 DPEP3Q9H4B8 488 aa24.18■■□□□ 1.46
PABPN1-207ENST00000556821 HLA-DRAP01903 254 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 BMP6P22004 513 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 GNL1P36915 607 aaPredicted RBP24.17■■□□□ 1.46
PABPN1-207ENST00000556821 GCLMP48507 274 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 CDH8P55286 799 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 ANKRD40Q6AI12 368 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 MYCBPAPQ8TBZ2 947 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 RSPRY1Q96DX4 576 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 GPR88Q9GZN0 384 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 ATXN3LQ9H3M9 355 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 TRPV4Q9HBA0 871 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 ZFP14Q9HCL3 533 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 ARHGEF3Q9NR81 526 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 DMXL1Q9Y485 3027 aa24.17■■□□□ 1.46
PABPN1-207ENST00000556821 FGF19O95750 216 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 KRT13P13646 458 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 VIPR2P41587 438 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 PIK3CAP42336 1068 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 MAGEA11P43364 429 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 RPL10AP62906 217 aaKnown RBP24.16■■□□□ 1.46
PABPN1-207ENST00000556821 CYP4F8P98187 520 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 MAPRE1Q15691 268 aaKnown RBP24.16■■□□□ 1.46
PABPN1-207ENST00000556821 SGSM1Q2NKQ1 1148 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 MDH1BQ5I0G3 518 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 SPOPLQ6IQ16 392 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 VITQ6UXI7 678 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 SCARA5Q6ZMJ2 495 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 C4orf50Q6ZRC1 276 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 TAS1R2Q8TE23 839 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 SLITRK6Q9H5Y7 841 aa24.16■■□□□ 1.46
PABPN1-207ENST00000556821 R4GN57 208 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms