RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MROH7Q68CQ1 1323 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 HMGCRP04035 888 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 HERC6Q8IVU3 1022 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 LPPQ93052 612 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 RSRC1Q96IZ7 334 aaKnown RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 PORCNQ9H237 461 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 CHST12Q9NRB3 414 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 TISP43B9A030 160 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 PSMD10O75832 226 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 PTPN11Q06124 597 aaPredicted RBP18.11■□□□□ 0.49
PTPN21-208ENST00000556564 TSNAXIP1Q2TAA8 658 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 ZNF507Q8TCN5 953 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 SPIRE2Q8WWL2 714 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 DPP7Q9UHL4 492 aa18.11■□□□□ 0.49
PTPN21-208ENST00000556564 FAM47DPA6NHR8 397 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 PLD1Q13393 1074 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 ZRANB3Q5FWF4 1079 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 BCL9LQ86UU0 1499 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 A0A0G2JND7 137 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 GJB1P08034 283 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 GABPB1Q06547 395 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-208ENST00000556564 IFT88Q13099 833 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 HS6ST3Q8IZP7 471 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 ERLEC1Q96DZ1 483 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 CAPN7Q9Y6W3 813 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 E2F8A0AVK6 867 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 PIK3CDO00329 1044 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 POLD3Q15054 466 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-208ENST00000556564 NBPF20Q3BBV1 942 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 KCNK18Q7Z418 384 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 SPATA4Q8NEY3 305 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 SLC20A1Q8WUM9 679 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 ARHGEF38Q9NXL2 777 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.1■□□□□ 0.49
PTPN21-208ENST00000556564 HES2Q9Y543 173 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 SNCAIPQ9Y6H5 919 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 TSPAN3O60637 253 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 CCDC130P13994 396 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 SYN2Q92777 582 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-208ENST00000556564 PTPRN2Q92932 1015 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 CYP3A43Q9HB55 503 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 HMGB1P1B2RPK0 211 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-208ENST00000556564 ARL4DP49703 201 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 CDH8P55286 799 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 ADCK2Q7Z695 626 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 SLC13A4Q9UKG4 626 aa18.1■□□□□ 0.49
PTPN21-208ENST00000556564 BARX2Q9UMQ3 279 aaPredicted RBP18.1■□□□□ 0.49
PTPN21-208ENST00000556564 NFASCO94856 1347 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 A0A087X0B3 334 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 SPATA31C2B4DYI2 1134 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 NFKBIEO00221 500 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 KIF3CO14782 793 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 ZBTB48P10074 688 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 KCNA1Q09470 495 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 ZSCAN26Q16670 478 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 FAM110CQ1W6H9 321 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 LLGL2Q6P1M3 1020 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 HELQQ8TDG4 1101 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 MRFAP1Q9Y605 127 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 LRRIQ3A6PVS8 624 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 CD52P31358 61 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 GRK4P32298 578 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 KIAA0319LQ8IZA0 1049 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 AGR3Q8TD06 166 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 MTMR9Q96QG7 549 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 LRRC1Q9BTT6 524 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 SCUBE2Q9NQ36 999 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 C20orf96Q9NUD7 363 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 SMPD4Q9NXE4 827 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 TPX2Q9ULW0 747 aaKnown RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 CLCA2Q9UQC9 943 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 CTNNB1P35222 781 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 KPNA1P52294 538 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 INTS13Q9NVM9 706 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 ATP9AO75110 1047 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 CCZ1BP86790 482 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 CCZ1P86791 482 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 NFE2Q16621 373 aaPredicted RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 NUGGCQ68CJ6 796 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 CIPCQ9C0C6 399 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 RIPK3Q9Y572 518 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 MRPL42Q9Y6G3 142 aaKnown RBP18.09■□□□□ 0.49
PTPN21-208ENST00000556564 PMPCBO75439 489 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 ANP32DO95626 131 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 ARHGEF19Q8IW93 802 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 UCMAQ8WVF2 138 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 KCNMB3Q9NPA1 279 aa18.09■□□□□ 0.49
PTPN21-208ENST00000556564 AP3B1O00203 1094 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 FBXO21O94952 628 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 GLRA2P23416 452 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 ADIGQ0VDE8 80 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 AIPL1Q9NZN9 384 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 TSPAN16Q9UKR8 245 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 MICAL2O94851 1124 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 CCDC157Q569K6 752 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 SYDE1Q6ZW31 735 aaPredicted RBP18.08■□□□□ 0.49
PTPN21-208ENST00000556564 FAM131BQ86XD5 332 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 EMC1Q8N766 993 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 339.9 ms