RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CTU1Q7Z7A3 348 aaKnown RBP20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 TMEM86AQ8N2M4 240 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 ST7Q9NRC1 585 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 HESX1Q9UBX0 185 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 GOLGA8SH3BPF8 625 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 ENPP3O14638 875 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 B4GALT3O60512 393 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 ATP2C2O75185 946 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 FGGP02679 453 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 SETSIPP0DME0 302 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 KRT3P12035 628 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 COL6A1P12109 1028 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 RFC1P35251 1148 aaPredicted RBP20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 AADACL2Q6P093 401 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 FBXO46Q6PJ61 603 aaPredicted RBP20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 ANKRD52Q8NB46 1076 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 UROC1Q96N76 676 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 TOX2Q96NM4 488 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 SLC4A5Q9BY07 1137 aa20.65■□□□□ 0.9
RBFOX1-215ENST00000553186 E5RJQ4 531 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 PYGMP11217 842 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 ACAT1P24752 427 aaKnown RBP20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 PDE4CQ08493 712 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 CCDC142Q17RM4 750 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 TCTN1Q2MV58 587 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 DSTYKQ6XUX3 929 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 JOSD2Q8TAC2 188 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 SLC2A14Q8TDB8 520 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 STK32AQ8WU08 396 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 TMEM161AQ9NX61 479 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 DDX43Q9NXZ2 648 aaKnown RBP20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 RAB21Q9UL25 225 aa20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 TIMM13Q9Y5L4 95 aaPredicted RBP20.64■□□□□ 0.89
RBFOX1-215ENST00000553186 GABBR2O75899 941 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 TKTP29401 623 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 LHX1P48742 406 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 RWDD2BP57060 319 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 TAS2R40P59535 323 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 RBM10P98175 930 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 DSC1Q08554 894 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 TRIM60Q495X7 471 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 PAN2Q504Q3 1202 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 C1orf53Q5VUE5 145 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 TMEM110Q86TL2 294 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 IPO4Q8TEX9 1081 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 DIS3LQ8TF46 1054 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 LRRC1Q9BTT6 524 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 DNAI2Q9GZS0 605 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 HIPK3Q9H422 1215 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 LCMT1Q9UIC8 334 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 F8VP50 259 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 PTPN1P18031 435 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 ADORA2BP29275 332 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 RGS7P49802 495 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 TLE2Q04725 743 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 NOMO2Q5JPE7 1267 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 ZNF280BQ86YH2 543 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 NIPA2Q8N8Q9 360 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 FNIP1Q8TF40 1166 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 SEPT8Q92599 483 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 ARMC5Q96C12 935 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 SCLYQ96I15 445 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 HNRNPABQ99729 332 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 AP1M1Q9BXS5 423 aa20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 ELAC1Q9H777 363 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 MKI67P46013 3256 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-215ENST00000553186 TARSL2A2RTX5 802 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 I3L4J1 428 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 DDHD2O94830 711 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 ITGB1P05556 798 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 BCAT1P54687 386 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 BST2Q10589 180 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 PIGHQ14442 188 aaPredicted RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 DCLRE1AQ6PJP8 1040 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 FAM43BQ6ZT52 329 aaPredicted RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 FUKQ8N0W3 1084 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 MIS12Q9H081 205 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 METTL5Q9NRN9 209 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 DCDC2CA8MYV0 355 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 F8W810 466 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 M0QZQ0 153 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 PIK3R2O00459 728 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 HSPA8P11142 646 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 PAX3P23760 479 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 BRCC3P46736 316 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 RPL34P49207 117 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 PAQR9Q6ZVX9 377 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 HDAC7Q8WUI4 952 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 APBB2Q92870 758 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 PIWIL1Q96J94 861 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 CRTAC1Q9NQ79 661 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 TBC1D13Q9NVG8 400 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 NR2E1Q9Y466 385 aa20.62■□□□□ 0.89
RBFOX1-215ENST00000553186 KRIT1O00522 736 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 PSTPIP1O43586 416 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 CXCL10P02778 98 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 CYP11A1P05108 521 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 CLCN6P51797 869 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms