RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 OR6B3Q8NGW1 331 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 BCL7CQ8WUZ0 217 aaPredicted RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 RSPH1Q8WYR4 309 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 TOP1MTQ969P6 601 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF689Q96CS4 500 aaPredicted RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CYFIP2Q96F07 1278 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 SUSD3Q96L08 255 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 RTP3Q9BQQ7 232 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 NT5C1AQ9BXI3 368 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 UBE2OQ9C0C9 1292 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CWH43Q9H720 699 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 MARCH5Q9NX47 278 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 PRKAG2Q9UGJ0 569 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 PUF60Q9UHX1 559 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 CYTH4Q9UIA0 394 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 GUCA1BQ9UMX6 200 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 PRG3Q9Y2Y8 225 aaPredicted RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 TIMM13Q9Y5L4 95 aaPredicted RBP8.6□□□□□ -1.03
DEPDC4-207ENST00000549249 NCANO14594 1321 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 A8MXQ7 604 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 NRP1O14786 923 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 ATP2C2O75185 946 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 RTN2O75298 545 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 BAIAP3O94812 1187 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 MICAL2O94851 1124 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 FTLP02792 175 aaPredicted RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 AMHP03971 560 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PDGFRBP09619 1106 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 H2AFZP0C0S5 128 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM163BP0C2L3 166 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM253P0C7T8 217 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 ABCB4P21439 1286 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 ACAT1P24752 427 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TKTP29401 623 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 GNL1P36915 607 aaPredicted RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PBX3P40426 434 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 BCAR1P56945 870 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PSMC1P62191 440 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 CENPCQ03188 943 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PTP4A2Q12974 167 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 CNGA2Q16280 664 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PKDCCQ504Y2 493 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 ARHGAP29Q52LW3 1261 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM240Q5SV17 173 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PPP1R26Q5T8A7 1209 aaPredicted RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM117BQ6P1L5 589 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TRIM72Q6ZMU5 477 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF365Q70YC5 407 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 H2AFVQ71UI9 128 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 MON1BQ7L1V2 547 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 OTOP2Q7RTS6 562 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TTC30AQ86WT1 665 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TDHQ8IZJ6 230 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 CRYBG2Q8N1P7 616 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TMEM86AQ8N2M4 240 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 LRRC43Q8N309 656 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 TTC39CQ8N584 583 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 C12orf29Q8N999 325 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 C1orf131Q8NDD1 294 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 CPA5Q8WXQ8 436 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 HEXIM2Q96MH2 286 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM193BQ96PV7 902 aaPredicted RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 WDR24Q96S15 920 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 LBHD1Q9BQE6 289 aaPredicted RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 MRPL9Q9BYD2 267 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 THAP2Q9H0W7 228 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 SNX25Q9H3E2 840 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM49BQ9NUQ9 324 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 INTUQ9ULD6 942 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PAXBP1Q9Y5B6 917 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 PLXNA4Q9HCM2 1894 aa8.59□□□□□ -1.03
DEPDC4-207ENST00000549249 MACROD2A1Z1Q3 448 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 ANKRD62A6NC57 917 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 BTNL10A8MVZ5 291 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 NT5C1B-RDH14C9J2C7 533 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 KRT86O43790 486 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 EFCAB14O75071 495 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 MOCS3O95396 460 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 LSM8O95777 96 aaKnown RBP8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 GALTP07902 379 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 ODC1P11926 461 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TNNT1P13805 278 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 CCDC130P13994 396 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 TYMPP19971 482 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 PAX3P23760 479 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 MAGEA10P43363 369 aaPredicted RBP8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 GUCA2AQ02747 115 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 KIF5AQ12840 1032 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 PTPN14Q15678 1187 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 GOLGA7BQ2TAP0 167 aa8.58□□□□□ -1.04
DEPDC4-207ENST00000549249 LRIT3Q3SXY7 679 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms