RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 DCLK3Q9C098 648 aa17.89■□□□□ 0.45
NELFA-216ENST00000542778 SUDS3Q9H7L9 328 aaPredicted RBP17.89■□□□□ 0.45
NELFA-216ENST00000542778 TMEM165Q9HC07 324 aa17.89■□□□□ 0.45
NELFA-216ENST00000542778 BTBD7Q9P203 1132 aa17.89■□□□□ 0.45
NELFA-216ENST00000542778 POC1B-GALNT4F8VUJ3 575 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 CCNE2O96020 404 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 TRIM49P0CI25 452 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 TRIM49CP0CI26 452 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 GRIA2P42262 883 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 MIER3Q7Z3K6 550 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 CDCA5Q96FF9 252 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 RBM15Q96T37 977 aaKnown RBP eCLIP17.88■□□□□ 0.452e-7■■□□□ 13.1
NELFA-216ENST00000542778 TUFT1Q9NNX1 390 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 FBXO6Q9NRD1 293 aaPredicted RBP17.88■□□□□ 0.45
NELFA-216ENST00000542778 NEU2Q9Y3R4 380 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 TMCC1O94876 653 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 ESRRAP11474 423 aaPredicted RBP17.88■□□□□ 0.45
NELFA-216ENST00000542778 SERPINB3P29508 390 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 CNTN2Q02246 1040 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 SP4Q02446 784 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 MTA1Q13330 715 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 TTLL12Q14166 644 aaPredicted RBP17.88■□□□□ 0.45
NELFA-216ENST00000542778 KRT72Q14CN4 511 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 CFAP157Q5JU67 520 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 IZUMO3Q5VZ72 239 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 GADL1Q6ZQY3 521 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 ACAD11Q709F0 780 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 CFAP57Q96MR6 1250 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 PCDHB18PQ96TA0 734 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 HERPUD2Q9BSE4 406 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 NDE1Q9NXR1 346 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 MYH11P35749 1972 aa17.88■□□□□ 0.45
NELFA-216ENST00000542778 PIK3CAP42336 1068 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 MYL7Q01449 175 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 CCDC62Q6P9F0 684 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 ARHGAP24Q8N264 748 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 MPP4Q96JB8 637 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 FAM161BQ96MY7 647 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 OSBPL8Q9BZF1 889 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 EBF3Q9H4W6 596 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 A0A1W2PPM1 405 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 ATP9BO43861 1147 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 NR3C2P08235 984 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 EPHX2P34913 555 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 PLVAPQ9BX97 442 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 ARHGEF4Q9NR80 690 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 ZNF232Q9UNY5 417 aa17.87■□□□□ 0.45
NELFA-216ENST00000542778 hCG_2014768A0A024R1R8 64 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 MAGEC1O60732 1142 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 MAGEA10P43363 369 aaPredicted RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 ARFIP2P53365 341 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 CDK16Q00536 496 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 HNRNPDQ14103 355 aaKnown RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 TRIM42Q8IWZ5 723 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 ZNF276Q8N554 614 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 BBOF1Q8ND07 529 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 RIT2Q99578 217 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 TEX13BQ9BXU2 312 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 MAK16Q9BXY0 300 aaKnown RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 TRIM55Q9BYV6 548 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 PHACTR1Q9C0D0 580 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 R3HDM2Q9Y2K5 976 aaKnown RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 WDR91A4D1P6 747 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 OPHN1O60890 802 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 BCRP11274 1271 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 PIM1P11309 404 aaPredicted RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 PLS3P13797 630 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 RFX1P22670 979 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 ADRA1DP25100 572 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 ZBTB16Q05516 673 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 ZCCHC9Q8N567 271 aaKnown RBP17.86■□□□□ 0.45
NELFA-216ENST00000542778 MYCT1Q8N699 235 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.86■□□□□ 0.45
NELFA-216ENST00000542778 MKNK1Q9BUB5 465 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 SAYSD1Q9NPB0 183 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 CSADQ9Y600 493 aa17.86■□□□□ 0.45
NELFA-216ENST00000542778 SMIM31A0A1B0GVY4 71 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 CYP1A2P05177 515 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 HARSP12081 509 aaKnown RBP17.85■□□□□ 0.45
NELFA-216ENST00000542778 HPCAP84074 193 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 SH3D19Q5HYK7 790 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 RIPOR1Q6ZS17 1223 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 NET1Q7Z628 596 aaPredicted RBP17.85■□□□□ 0.45
NELFA-216ENST00000542778 VSIG10LQ86VR7 867 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 DAW1Q8N136 415 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 LMO3Q8TAP4 145 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 NMD3Q96D46 503 aaKnown RBP17.85■□□□□ 0.45
NELFA-216ENST00000542778 FIZ1Q96SL8 496 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 TMEM120AQ9BXJ8 343 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 KCNK13Q9HB14 408 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 DNAJB4Q9UDY4 337 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 CHMP2BQ9UQN3 213 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 WDR81Q562E7 1941 aa17.85■□□□□ 0.45
NELFA-216ENST00000542778 TBCAO75347 108 aaKnown RBP17.84■□□□□ 0.45
NELFA-216ENST00000542778 USP1O94782 785 aa17.84■□□□□ 0.45
NELFA-216ENST00000542778 AP2B1P63010 937 aa17.84■□□□□ 0.45
NELFA-216ENST00000542778 NFIL3Q16649 462 aa17.84■□□□□ 0.45
NELFA-216ENST00000542778 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.84■□□□□ 0.45
NELFA-216ENST00000542778 PLA2G4FQ68DD2 849 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms