RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	ERGIC3	Q9Y282	383 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	VWA7	Q9Y334	891 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MYO3B	Q8WXR4	1341 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SALL3	Q9BXA9	1300 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	CHD2	O14647	1828 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	CLRN2	A0PK11	232 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	BET1	O15155	118 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SSX5	O60225	188 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ADAM11	O75078	769 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	NDUFS6	O75380	124 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	EYA4	O95677	639 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ANPEP	P15144	967 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ECHS1	P30084	290 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SHMT1	P34896	483 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	CDK9	P50750	372 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	EIF3B	P55884	814 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SRP54	P61011	504 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	STX1B	P61266	288 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	DAB2	P98082	770 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	CDR2	Q01850	454 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ITGAD	Q13349	1161 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	AP3B2	Q13367	1082 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PLD1	Q13393	1074 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	THOC5	Q13769	683 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	KRT81	Q14533	505 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ZNF792	Q3KQV3	632 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PLEKHG6	Q3KR16	790 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	C12orf60	Q5U649	245 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	USPL1	Q5W0Q7	1092 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	KIAA1841	Q6NSI8	718 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	POMZP3	Q6PJE2	187 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ISLR2	Q6UXK2	745 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	AGMO	Q6ZNB7	445 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	APTX	Q7Z2E3	356 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ARPIN	Q7Z6K5	226 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MRPL10	Q7Z7H8	261 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PDSS2	Q86YH6	399 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	TRMT44	Q8IYL2	757 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PM20D2	Q8IYS1	436 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	LRRC47	Q8N1G4	583 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	NLGN1	Q8N2Q7	840 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MRPL50	Q8N5N7	158 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	BEND7	Q8N7W2	519 aa	Predicted RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	KCNH5	Q8NCM2	988 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	OR8K3	Q8NH51	312 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	POMGNT1	Q8WZA1	660 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	TTC9	Q92623	222 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ANKS1A	Q92625	1134 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	GLG1	Q92896	1179 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	TNFRSF25	Q93038	417 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	TP53INP1	Q96A56	240 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	FEM1C	Q96JP0	617 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	CITED4	Q96RK1	184 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MEIS3	Q99687	375 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MIPEP	Q99797	713 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	C17orf62	Q9BQA9	187 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	FERMT1	Q9BQL6	677 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SEC22C	Q9BRL7	303 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ZKSCAN3	Q9BRR0	538 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	UBAC1	Q9BSL1	405 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	C9orf16	Q9BUW7	83 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MRPS26	Q9BYN8	205 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MKRN2	Q9H000	416 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	ISCU	Q9H1K1	167 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PABPC3	Q9H361	631 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	EPS8L2	Q9H6S3	715 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	LIN7B	Q9HAP6	207 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	MCCC2	Q9HCC0	563 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	CD209	Q9NNX6	404 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	BRD7	Q9NPI1	651 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	TIGAR	Q9NQ88	270 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	TBX22	Q9Y458	520 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PCDHGA2	Q9Y5H1	932 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SLC12A7	Q9Y666	1083 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	PTCH1	Q13635	1447 aa		4.85	□□□□□ -1.63
PCM1-215	ENST00000522275	EFCAB6	Q5THR3	1501 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	C1orf232	A0A0U1RR37	186 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	CHURC1-FNTB	B4DL54	471 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	UBAP1L	F5GYI3	381 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	RTCA	O00442	366 aa	Known RBP	4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	KPNA4	O00629	521 aa	Predicted RBP	4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	HMGN1	P05114	100 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	C6orf222	P0C671	652 aa	Predicted RBP	4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	HPGD	P15428	266 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	PFKFB1	P16118	471 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	CDC25A	P30304	524 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	CDH5	P33151	784 aa	Predicted RBP	4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	ARFIP1	P53367	373 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	YARS	P54577	528 aa	Known RBP	4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	NR1H2	P55055	460 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	GABRE	P78334	506 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	S100A12	P80511	92 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	GALK2	Q01415	458 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	OTUD4	Q01804	1114 aa	Known RBP	4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	TFDP1	Q14186	410 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	LRRC14	Q15048	493 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	CNGA2	Q16280	664 aa		4.84	□□□□□ -1.63
PCM1-215	ENST00000522275	IQSEC1	Q6DN90	963 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms