RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 RPGRIP1Q96KN7 1286 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 CCDC42Q96M95 316 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 WDR24Q96S15 920 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 UBL7Q96S82 380 aaPredicted RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 EIF3CQ99613 913 aaKnown RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 RAD9AQ99638 391 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 DESI2Q9BSY9 194 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 POLR3CQ9BUI4 534 aaPredicted RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 CARD6Q9BX69 1037 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 GBP3Q9H0R5 595 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 NDST4Q9H3R1 872 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 NSUN3Q9H649 340 aaKnown RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 ACSS3Q9H6R3 686 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 MRPL44Q9H9J2 332 aaKnown RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 TUFT1Q9NNX1 390 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 SLC39A2Q9NP94 309 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 DLL3Q9NYJ7 618 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 CDC23Q9UJX2 597 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 FEM1BQ9UK73 627 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 PCOLCE2Q9UKZ9 415 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 PCDHB10Q9UN67 800 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 ADAMTS5Q9UNA0 930 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 DNM3Q9UQ16 869 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 FAM50BQ9Y247 325 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 TMX2Q9Y320 296 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 MRPL11Q9Y3B7 192 aaKnown RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 MSRB2Q9Y3D2 182 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 COL4A3BPQ9Y5P4 624 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 EPN1Q9Y6I3 576 aaPredicted RBP4.3□□□□□ -1.72
PVT1-211ENST00000521600 KIAA1217Q5T5P2 1943 aa4.3□□□□□ -1.72
PVT1-211ENST00000521600 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 DSPP15924 2871 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 UBE4BO95155 1302 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 DENND4AQ7Z401 1863 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 ANO9A1A5B4 782 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CTAGE15A4D2H0 777 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 GCOM1H8Y6P7 765 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 VWA5AO00534 786 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CETN3O15182 167 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 WDR46O15213 610 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 EIF3DO15371 548 aaKnown RBP eCLIP4.29□□□□□ -1.72
PVT1-211ENST00000521600 SLC16A3O15427 465 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 CALUO43852 315 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 EDIL3O43854 480 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 ZEB2O60315 1214 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 TBCAO75347 108 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 CABYRO75952 493 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 BAIAP3O94812 1187 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 LRIG2O94898 1065 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CST3P01034 146 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 POLR2MP0CAP2 368 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CTAGE8P0CG41 777 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 H2AFXP16104 143 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 MCM3P25205 808 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 RPL13P26373 211 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 HNRNPH3P31942 346 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 GBP1P32455 592 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 RFC2P35250 354 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CHMP4BP1P59074 171 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 TNFAIP2Q03169 654 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 GABPB1Q06547 395 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 CKAP4Q07065 602 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 KIF5AQ12840 1032 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 IFRD2Q12894 506 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 GPS2Q13227 327 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 PUM1Q14671 1186 aaKnown RBP eCLIP4.29□□□□□ -1.72
PVT1-211ENST00000521600 MBTPS1Q14703 1052 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 BRD3Q15059 726 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 ERCC6LQ2NKX8 1250 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 USH1GQ495M9 461 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CCDC40Q4G0X9 1142 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 EPC2Q52LR7 807 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 SGO2Q562F6 1265 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 PRR16Q569H4 304 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 MIIPQ5JXC2 388 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 TEX35Q5T0J7 233 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CCDC122Q5T0U0 273 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 NCAPH2Q6IBW4 605 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CCDC70Q6NSX1 233 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 FBXO38Q6PIJ6 1188 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 VHLLQ6RSH7 139 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
PVT1-211ENST00000521600 Q6ZS46 218 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 LRRC55Q6ZSA7 311 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 ARMCX2Q7L311 632 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 RSRC2Q7L4I2 434 aaKnown RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 ARMCX6Q7L4S7 300 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CACNA2D4Q7Z3S7 1137 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CTAGE6Q86UF2 777 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 FMNL3Q8IVF7 1028 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CTAGE4Q8IX94 777 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 SYT2Q8N9I0 419 aaPredicted RBP4.29□□□□□ -1.72
PVT1-211ENST00000521600 TRIM58Q8NG06 486 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 ETNPPLQ8TBG4 499 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 LRRC15Q8TF66 581 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 FBLIM1Q8WUP2 373 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 CRYGNQ8WXF5 182 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 JAKMIP2Q96AA8 810 aa4.29□□□□□ -1.72
PVT1-211ENST00000521600 MEGF10Q96KG7 1140 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms