RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 APOBEC3GQ9HC16 384 aaKnown RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 ERVK-5Q9HDB9 667 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 XPNPEP3Q9NQH7 507 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 LGALS13Q9UHV8 139 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 NR2E1Q9Y466 385 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 PCDHB4Q9Y5E5 795 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 TLDC2A0PJX2 215 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 LUC7L3O95232 432 aaKnown RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 CYP1A1P04798 512 aaPredicted RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 TMEM191BP0C7N4 346 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 UNGP13051 313 aaPredicted RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 CCNG1P51959 295 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 CLNS1AP54105 237 aaKnown RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 RWDD2BP57060 319 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 BNIP1Q12981 228 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 PPP1R21Q6ZMI0 780 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 RELL1Q8IUW5 271 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 APLFQ8IW19 511 aaPredicted RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 UBR7Q8N806 425 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 KLHDC9Q8NEP7 349 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 DYDC1Q8WWB3 177 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 CKAP2Q8WWK9 683 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 PRMT1Q99873 361 aaKnown RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 MTG1Q9BT17 334 aaPredicted RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 FAM124BQ9H5Z6 455 aaPredicted RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 PPCSQ9HAB8 311 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 RXFP1Q9HBX9 757 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.32■□□□□ 0.681e-15■■■■■ 125
SDC2-202ENST00000518385 BAIAP2L1Q9UHR4 511 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 RPL26L1Q9UNX3 145 aaKnown RBP19.32■□□□□ 0.68
SDC2-202ENST00000518385 COG5Q9UP83 839 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 C15orf41Q9Y2V0 281 aa19.32■□□□□ 0.68
SDC2-202ENST00000518385 A0A087WZ62 844 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 MBLAC1A4D2B0 266 aaPredicted RBP19.31■□□□□ 0.68
SDC2-202ENST00000518385 E7ENQ6 273 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 C1QTNF8P60827 252 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 COPS2P61201 443 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 ADAM17P78536 824 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 AMHR2Q16671 573 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 ARHGEF18Q6ZSZ5 1173 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 NT5DC4Q86YG4 428 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 CCDC105Q8IYK2 499 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 CCDC77Q9BR77 488 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 FDXACB1Q9BRP7 624 aaPredicted RBP19.31■□□□□ 0.68
SDC2-202ENST00000518385 NIF3L1Q9GZT8 377 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 SEMA4AQ9H3S1 761 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 MINDY3Q9H8M7 445 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 WBP1LQ9NX94 342 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 NUB1Q9Y5A7 615 aa19.31■□□□□ 0.68
SDC2-202ENST00000518385 FSCN2O14926 492 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 CLGNO14967 610 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 GJB1P08034 283 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 CST5P28325 142 aaPredicted RBP19.3■□□□□ 0.68
SDC2-202ENST00000518385 GRK4P32298 578 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 ZNF132P52740 706 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 SLC18A1P54219 525 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 CENPCQ03188 943 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 EEF1DP3Q658K8 133 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 THNSL1Q8IYQ7 743 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 KIAA0319LQ8IZA0 1049 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 ZNF653Q96CK0 615 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 C18orf8Q96DM3 657 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.3■□□□□ 0.68
SDC2-202ENST00000518385 TRIM17Q9Y577 477 aa19.3■□□□□ 0.68
SDC2-202ENST00000518385 INHAP05111 366 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 NCALDP61601 193 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 IFI35P80217 286 aaPredicted RBP19.29■□□□□ 0.68
SDC2-202ENST00000518385 PTK6Q13882 451 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 SEZ6Q53EL9 994 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 LIN9Q5TKA1 542 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 SPOPLQ6IQ16 392 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 CCSAPQ6IQ19 270 aaPredicted RBP19.29■□□□□ 0.68
SDC2-202ENST00000518385 TMEM270Q6UE05 265 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 EXOC3L1Q86VI1 746 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 RBBP8NLQ8NC74 664 aaPredicted RBP19.29■□□□□ 0.68
SDC2-202ENST00000518385 ZNF564Q8TBZ8 553 aaPredicted RBP19.29■□□□□ 0.68
SDC2-202ENST00000518385 MAGEB18Q96M61 343 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 NUP85Q9BW27 656 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 MTMR12Q9C0I1 747 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 UBN1Q9NPG3 1134 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 ARHGEF3Q9NR81 526 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 TXLNGQ9NUQ3 528 aa19.29■□□□□ 0.68
SDC2-202ENST00000518385 B4GALT5O43286 388 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 GAS8O95995 478 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 CST3P01034 146 aaPredicted RBP19.28■□□□□ 0.68
SDC2-202ENST00000518385 RARAP10276 462 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 COMTP21964 271 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 GNA15P30679 374 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 HOXC8P31273 242 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 ATICP31939 592 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 SLC1A1P43005 524 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 NSFP46459 744 aaKnown RBP19.28■□□□□ 0.68
SDC2-202ENST00000518385 TFAMQ00059 246 aaKnown RBP19.28■□□□□ 0.68
SDC2-202ENST00000518385 HIC1Q14526 733 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 ZKSCAN8Q15776 578 aaPredicted RBP19.28■□□□□ 0.68
SDC2-202ENST00000518385 CMPK2Q5EBM0 449 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 RHBDF2Q6PJF5 856 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 SPATA21Q7Z572 469 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 MCOLN2Q8IZK6 566 aa19.28■□□□□ 0.68
SDC2-202ENST00000518385 SH3TC2Q8TF17 1288 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms