RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSBP1-214ENST00000498107 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 SUSD6Q92537 303 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 ZNF707Q96C28 371 aaPredicted RBP17.01■□□□□ 0.31
SSBP1-214ENST00000498107 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 CEP295NLQ96MC4 621 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 ASB2Q96Q27 587 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 ARID3AQ99856 593 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 DPEP3Q9H4B8 488 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 DAAM1Q9Y4D1 1078 aa17.01■□□□□ 0.31
SSBP1-214ENST00000498107 DLL1O00548 723 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 TRIM66O15016 1216 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 CCL16O15467 120 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 ATP1A3P13637 1013 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 PTPN2P17706 415 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 ANXA13P27216 316 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 UBXN1Q04323 297 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 TAF12Q16514 161 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 PHLDB3Q6NSJ2 640 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 ARHGEF19Q8IW93 802 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 WHAMMQ8TF30 809 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 MED10Q9BTT4 135 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 KIAA1257Q9ULG3 409 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 PCDHB4Q9Y5E5 795 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 REV3LO60673 3130 aa17■□□□□ 0.31
SSBP1-214ENST00000498107 SERPINC1P01008 464 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 PAEPP09466 180 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 CYP2F1P24903 491 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 GRIK1P39086 918 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 ZNF394Q53GI3 561 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 TMEM270Q6UE05 265 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 UBR7Q8N806 425 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 SMARCD1Q96GM5 515 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 HEXIM2Q96MH2 286 aaKnown RBP16.99■□□□□ 0.31
SSBP1-214ENST00000498107 TWNKQ96RR1 684 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 B3GNT5Q9BYG0 378 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 WDR6Q9NNW5 1121 aaKnown RBP16.99■□□□□ 0.31
SSBP1-214ENST00000498107 PLCB1Q9NQ66 1216 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 EHD2Q9NZN4 543 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 PRKAG3Q9UGI9 489 aa16.99■□□□□ 0.31
SSBP1-214ENST00000498107 FGF19O95750 216 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 BDNFP23560 247 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 RAD23BP54727 409 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 ORC1Q13415 861 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 TJAP1Q5JTD0 557 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 CYP4A22Q5TCH4 519 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 SCN4BQ8IWT1 228 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 TTC9BQ8N6N2 239 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 SLC4A11Q8NBS3 891 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 PSMG2Q969U7 264 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 CYFIP2Q96F07 1278 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 PCMTD1Q96MG8 357 aaPredicted RBP16.98■□□□□ 0.31
SSBP1-214ENST00000498107 HNRNPABQ99729 332 aaKnown RBP16.98■□□□□ 0.31
SSBP1-214ENST00000498107 PHF7Q9BWX1 381 aaPredicted RBP16.98■□□□□ 0.31
SSBP1-214ENST00000498107 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
SSBP1-214ENST00000498107 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
SSBP1-214ENST00000498107 ASAH2Q9NR71 780 aa16.98■□□□□ 0.31
SSBP1-214ENST00000498107 CLUHO75153 1309 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 ZNF197O14709 1029 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 CSH1P0DML2 217 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 CSH2P0DML3 217 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 ACO1P21399 889 aaKnown RBP16.97■□□□□ 0.31
SSBP1-214ENST00000498107 KCNQ1P51787 676 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 SLC8A3P57103 927 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 KCNMA1Q12791 1236 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 STILQ15468 1287 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 CCDC142Q17RM4 750 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
SSBP1-214ENST00000498107 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 KLHDC7AQ5VTJ3 777 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 APTXQ7Z2E3 356 aaKnown RBP16.97■□□□□ 0.31
SSBP1-214ENST00000498107 GRASPQ7Z6J2 395 aaPredicted RBP16.97■□□□□ 0.31
SSBP1-214ENST00000498107 FAM35AQ86V20 835 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 C12orf29Q8N999 325 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 SLC2A14Q8TDB8 520 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 KAT5Q92993 513 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 SPATA17Q96L03 361 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 C8orf48Q96LL4 319 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 KREMEN1Q96MU8 473 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 ERGIC2Q96RQ1 377 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 ZNF518BQ9C0D4 1074 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 SIX2Q9NPC8 291 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 DMAP1Q9NPF5 467 aaPredicted RBP16.97■□□□□ 0.31
SSBP1-214ENST00000498107 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
SSBP1-214ENST00000498107 FAM49BQ9NUQ9 324 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 CEP72Q9P209 647 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 DNAJC12Q9UKB3 198 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 CNTN6Q9UQ52 1028 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 NR2E1Q9Y466 385 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 PTPRDP23468 1912 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 C2orf16Q68DN1 1984 aa16.97■□□□□ 0.31
SSBP1-214ENST00000498107 EYSQ5T1H1 3165 aa16.96■□□□□ 0.31
SSBP1-214ENST00000498107 TPM3P06753 285 aa16.96■□□□□ 0.31
SSBP1-214ENST00000498107 FAM200BP0CF97 657 aa16.96■□□□□ 0.31
SSBP1-214ENST00000498107 VDRP11473 427 aa16.96■□□□□ 0.31
SSBP1-214ENST00000498107 BMP1P13497 986 aa16.96■□□□□ 0.31
SSBP1-214ENST00000498107 KRT5P13647 590 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms