RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 TMEM130Q8N3G9 435 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 C1orf127Q8N9H9 656 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 TTC8Q8TAM2 541 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 NOC3LQ8WTT2 800 aaKnown RBP8.28□□□□□ -1.08
PTPRK-214ENST00000495748 GAB3Q8WWW8 586 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 USP13Q92995 863 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-214ENST00000495748 ATP2A3Q93084 1043 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 DNAJC19Q96DA6 116 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 INTS4Q96HW7 963 aaKnown RBP8.28□□□□□ -1.08
PTPRK-214ENST00000495748 LRRC3BQ96PB8 259 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 P2RY13Q9BPV8 354 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 CUEDC2Q9H467 287 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 TBC1D7Q9P0N9 293 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 FBXO2Q9UK22 296 aaPredicted RBP8.28□□□□□ -1.08
PTPRK-214ENST00000495748 L1RE1Q9UN81 338 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 SNX9Q9Y5X1 595 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 TCHHQ07283 1943 aa8.28□□□□□ -1.08
PTPRK-214ENST00000495748 RALGAPA1Q6GYQ0 2036 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 CNOT1A5YKK6 2376 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 COL4A2P08572 1712 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 FRMD3A2A2Y4 597 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 MYMKA6NI61 221 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 RPP40O75818 363 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 NOL4O94818 638 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 CCDC192P0DO97 292 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 TCF3P15923 654 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 SYT1P21579 422 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 PPP3CCP48454 512 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 SNRPFP62306 86 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 CEBPZQ03701 1054 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 TNK2Q07912 1038 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 MTF1Q14872 753 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 SLC39A14Q15043 492 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 STK38Q15208 465 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 DUOXA2Q1HG44 320 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 AASDHQ4L235 1098 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 VSTM1Q6UX27 236 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 USP49Q70CQ1 688 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 SCN4BQ8IWT1 228 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 KIAA1958Q8N8K9 716 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 C12orf50Q8NA57 414 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 OSCP1Q8WVF1 389 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 SAAL1Q96ER3 474 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 EBF3Q9H4W6 596 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 TRPC7Q9HCX4 862 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 PARD6AQ9NPB6 346 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 INTS13Q9NVM9 706 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 DUS2Q9NX74 493 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 MAGEC2Q9UBF1 373 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 GTF3C4Q9UKN8 822 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 CDH9Q9ULB4 789 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 PCDHGA5Q9Y5G8 931 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.27□□□□□ -1.09
PTPRK-214ENST00000495748 DCHS1Q96JQ0 3298 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 ACACBO00763 2458 aa8.27□□□□□ -1.09
PTPRK-214ENST00000495748 ZNF638Q14966 1978 aaKnown RBP8.26□□□□□ -1.09
PTPRK-214ENST00000495748 SPAG17Q6Q759 2223 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 DCDC2BA2VCK2 349 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 GOLGA8IPA6NC78 632 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 GOLGA8JA6NMD2 632 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 SLC9A3R1O14745 358 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-214ENST00000495748 GABRDO14764 452 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 TRIM66O15016 1216 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 AXIN1O15169 862 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 EIF3DO15371 548 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRK-214ENST00000495748 RHOBTB1O94844 696 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 PRPF6O94906 941 aaKnown RBP8.26□□□□□ -1.09
PTPRK-214ENST00000495748 EPN2O95208 641 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 NFATC1O95644 943 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 ZNF806P0C7X5 589 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 HDCP19113 662 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 CYP2F1P24903 491 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 GRIK1P39086 918 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 LIMK1P53667 647 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 KCNA1Q09470 495 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 RESTQ13127 1097 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 ELF2Q15723 593 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 DDR2Q16832 855 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 FSTL4Q6MZW2 842 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 DENND5BQ6ZUT9 1274 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 TMEM150AQ86TG1 271 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 WDR49Q8IV35 697 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-214ENST00000495748 IQUBQ8NA54 791 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 CD101Q93033 1021 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 HPDLQ96IR7 371 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 SPATA17Q96L03 361 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 ZNF396Q96N95 335 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-214ENST00000495748 CLIC6Q96NY7 704 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 FNBP1Q96RU3 617 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 SYT15Q9BQS2 421 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 CBWD1Q9BRT8 395 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 TNMDQ9H2S6 317 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 PCIF1Q9H4Z3 704 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 ECT2Q9H8V3 914 aa8.26□□□□□ -1.09
PTPRK-214ENST00000495748 PDE11AQ9HCR9 933 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms