RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 INSCQ1MX18 579 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 TEDDM1Q5T9Z0 273 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 VPS53Q5VIR6 699 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 RGS7BPQ6MZT1 257 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 VWA1Q6PCB0 445 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 TSHZ1Q6ZSZ6 1077 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 MRGPRGQ86SM5 289 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 MICU3Q86XE3 530 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 SLC15A3Q8IY34 581 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 SLC16A11Q8NCK7 471 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 OR56A3Q8NH54 315 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 MYCBPAPQ8TBZ2 947 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 MAML1Q92585 1016 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 TBCBQ99426 244 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 SERTAD3Q9UJW9 196 aa5.94□□□□□ -1.46
HMGB1P38-201ENST00000490557 LOC102723971A0A1B0GUV8 181 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 KPNA5O15131 536 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 RHOBTB3O94955 611 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 INMTO95050 263 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 IL18RAPO95256 599 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 ESRRBO95718 433 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 CHRM2P08172 466 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 PARP1P09874 1014 aaKnown RBP5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 TGM1P22735 817 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 FOLR3P41439 243 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 PIK3CBP42338 1070 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 INHBCP55103 352 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 KLF10Q13118 480 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 MAP9Q49MG5 647 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 CACHD1Q5VU97 1274 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 KAZNQ674X7 775 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 IL31Q6EBC2 164 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 GAS2L3Q86XJ1 694 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 SPARTQ8N0X7 666 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 AMER2Q8N7J2 671 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 BEND2Q8NDZ0 799 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 FKBP10Q96AY3 582 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 MSLNLQ96KJ4 702 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 TNIP3Q96KP6 325 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 MESP1Q9BRJ9 268 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 BRIP1Q9BX63 1249 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 SCAND2PQ9GZW5 306 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 SERHLQ9NQF3 203 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 COL20A1Q9P218 1284 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 MAST3O60307 1309 aa5.93□□□□□ -1.46
HMGB1P38-201ENST00000490557 hCG_1984214I3L0E3 225 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 RGS10O43665 173 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 RASAL1O95294 804 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 IFIT2P09913 472 aaKnown RBP5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 CARSP49589 748 aaKnown RBP5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 SEC24CP53992 1094 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 EIF2B5Q13144 721 aaKnown RBP5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 DAG1Q14118 895 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 SLC29A2Q14542 456 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 LONRF1Q17RB8 773 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 ERCC6LQ2NKX8 1250 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 NBPF8Q3BBV2 869 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 RNF44Q7L0R7 432 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZNF280BQ86YH2 543 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 LIX1LQ8IVB5 337 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 ACTRT2Q8TDY3 377 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 ATRIPQ8WXE1 791 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 LINC00476Q8WZB0 136 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 SLC9A6Q92581 669 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 IQCDQ96DY2 449 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 SNX22Q96L94 193 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 AMBRA1Q9C0C7 1298 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 TMPRSS5Q9H3S3 457 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 ZNF212Q9UDV6 495 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 PACSIN3Q9UKS6 424 aa5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 NDRG4Q9ULP0 352 aaKnown RBP5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 MRPS17Q9Y2R5 130 aaKnown RBP5.92□□□□□ -1.46
HMGB1P38-201ENST00000490557 GRID2IPA4D2P6 1211 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 POM121BA6NF01 834 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 RAB27BO00194 218 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 PPM1DO15297 605 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 FOXN1O15353 648 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 MPPED1O15442 326 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 THAP12O43422 761 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 PROM1O43490 865 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 GCP02774 474 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 SLC5A1P13866 664 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 PRIM2P49643 509 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 PDE6CP51160 858 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 NEK3P51956 506 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 TGFB2P61812 414 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 MYO1EQ12965 1108 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 TBCCQ15814 346 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 UNC13DQ70J99 1090 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 BPIFB1Q8TDL5 484 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 PARD3BQ8TEW8 1205 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 PPP2R3CQ969Q6 453 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 ALG8Q9BVK2 526 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
HMGB1P38-201ENST00000490557 TOR3AQ9H497 397 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms