RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 DNMT3BQ9UBC3 853 aaKnown RBP2.82□□□□□ -1.96
ITGB1-213ENST00000484088 KCNE5Q9UJ90 142 aa2.82□□□□□ -1.96
ITGB1-213ENST00000484088 CDC23Q9UJX2 597 aa2.82□□□□□ -1.96
ITGB1-213ENST00000484088 ATP11BQ9Y2G3 1177 aa2.82□□□□□ -1.96
ITGB1-213ENST00000484088 PCDHGB2Q9Y5G2 931 aa2.82□□□□□ -1.96
ITGB1-213ENST00000484088 A0A087WV62 115 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 GAGE12BA1L429 117 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 GAGE12HA6NDE8 117 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ADM5C9JUS6 153 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 E7ENX8 843 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 POLRMTO00411 1230 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 APOL1O14791 398 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 AREL1O15033 823 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 CYP27B1O15528 508 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 DHHO43323 396 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 PLA2G6O60733 806 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 VPS4BO75351 444 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ERBB2P04626 1255 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 GNAI2P04899 355 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ANXA2P07355 339 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 PARP1P09874 1014 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 BTF3P20290 206 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ZEB1P37275 1124 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 KCNJ5P48544 419 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ANXA11P50995 505 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 LILRA4P59901 499 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 SP2Q02086 613 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 TAP2Q03519 686 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 CNGB1Q14028 1251 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 SMN1Q16637 294 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 GEN1Q17RS7 908 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 LONRF3Q496Y0 759 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 VPS53Q5VIR6 699 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 LAIR1Q6GTX8 287 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 Q6YL49 198 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 CATSPERGQ6ZRH7 1159 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 KIAA0408Q6ZU52 694 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 KCTD20Q7Z5Y7 419 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 MRGPRGQ86SM5 289 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ADGRG5Q8IZF4 528 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 CYP2W1Q8TAV3 490 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 MYEOVQ96EZ4 313 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 MED15Q96RN5 788 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 HEPHQ9BQS7 1158 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 CRB3Q9BUF7 120 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 SELENOOQ9BVL4 669 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 TTLL2Q9BWV7 592 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 CHMP4AQ9BY43 222 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 STK33Q9BYT3 514 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 UNKLQ9H9P5 680 aaKnown RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 PNPLA8Q9NP80 782 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 DKK4Q9UBT3 224 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 MID2Q9UJV3 735 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 SSX2IPQ9Y2D8 614 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 MAP3K2Q9Y2U5 619 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 TMX2Q9Y320 296 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 SNX13Q9Y5W8 968 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 EPN1Q9Y6I3 576 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-213ENST00000484088 FPGT-TNNI3KV9GXZ4 949 aa2.81□□□□□ -1.96
ITGB1-213ENST00000484088 SPATA31A3Q5VYP0 1347 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 WDR33Q9C0J8 1336 aaKnown RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 LOC102724159A0A0B4J2E5 919 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 PRAMEF33A0A0G2JMD5 474 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 FAM234BA2RU67 622 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 MYADML2A6NDP7 307 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 H7C4K7 107 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 TBC1D4O60343 1298 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 PRAMEF10O60809 474 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 SCAF4O95104 1147 aaKnown RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 SPDEFO95238 335 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 GPANK1O95872 356 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 ADH4P08319 380 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 VEGFAP15692 232 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 KCNA3P22001 575 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 EEF1GP26641 437 aaKnown RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 PDIA3P30101 505 aaKnown RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 BMPR1AP36894 532 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 GCLCP48506 637 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 TRAPPC10P48553 1259 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 CARSP49589 748 aaKnown RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 HNRNPMP52272 730 aaKnown RBP eCLIP2.8□□□□□ -1.962e-7■■■□□ 17
ITGB1-213ENST00000484088 DGKEP52429 567 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 VAV2P52735 878 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 INHBEP58166 350 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 MYO1EQ12965 1108 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 DYRK1AQ13627 763 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 RAB32Q13637 225 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 BRD3Q15059 726 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 PWP2Q15269 919 aaKnown RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 PTCHD3Q3KNS1 767 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 CD300EQ496F6 205 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 COLEC12Q5KU26 742 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 SP5Q6BEB4 398 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-213ENST00000484088 SLC30A10Q6XR72 485 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 SMC5Q8IY18 1101 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 GLIS1Q8NBF1 620 aa2.8□□□□□ -1.96
ITGB1-213ENST00000484088 CPEB3Q8NE35 698 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms