RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 TOX2Q96NM4 488 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 DEPDC7Q96QD5 511 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SRPK1Q96SB4 655 aaKnown RBP5.26□□□□□ -1.57
LRCH3-214ENST00000473177 C7orf25Q9BPX7 421 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 JPH2Q9BR39 696 aaPredicted RBP5.26□□□□□ -1.57
LRCH3-214ENST00000473177 HDAC8Q9BY41 377 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 ISCUQ9H1K1 167 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SLITRK6Q9H5Y7 841 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SH2D4AQ9H788 454 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 CERS4Q9HA82 394 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 ATP6V0A4Q9HBG4 840 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 CD320Q9NPF0 282 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 DDX4Q9NQI0 724 aaKnown RBP5.26□□□□□ -1.57
LRCH3-214ENST00000473177 GDF3Q9NR23 364 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SEMA3GQ9NS98 782 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 GPATCH2Q9NW75 528 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SNTG2Q9NY99 539 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SAMD15Q9P1V8 674 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 BCCIPQ9P287 314 aaKnown RBP eCLIP5.26□□□□□ -1.57
LRCH3-214ENST00000473177 RASAL2Q9UJF2 1139 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 VAV3Q9UKW4 847 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 INTUQ9ULD6 942 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 UTP11Q9Y3A2 253 aaKnown RBP5.26□□□□□ -1.57
LRCH3-214ENST00000473177 RABGAP1Q9Y3P9 1069 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 PCDHA11Q9Y5I1 949 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SLC4A7Q9Y6M7 1214 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 SLC4A4Q9Y6R1 1079 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 MYH3P11055 1940 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 DOCK1Q14185 1865 aa5.26□□□□□ -1.57
LRCH3-214ENST00000473177 ZNF536O15090 1300 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 LAMA4Q16363 1823 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 LOC285556D6RIA3 1793 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 E7ENQ6 273 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 E7EVH7 732 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 H3BS24 57 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 AGPSO00116 658 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 NDC80O14777 642 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ASAP2O43150 1006 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 RANBP6O60518 1105 aaKnown RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PPM1BO75688 479 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 DNAJC8O75937 253 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 MED26O95402 600 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PRAMEF1O95521 474 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ASNSP08243 561 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 SCG2P13521 617 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ATP2A2P16615 1042 aaKnown RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 SMARCA1P28370 1054 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ADORA2AP29274 412 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PRCPP42785 496 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 BTDP43251 543 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ACLYP53396 1101 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 NPEPPSP55786 919 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PPP2R2AP63151 447 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ICA1Q05084 483 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 BYSLQ13895 437 aaKnown RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 RPS6KA1Q15418 735 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ZNF174Q15697 407 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PFKFB3Q16875 520 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 CLEC16AQ2KHT3 1053 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 GAB4Q2WGN9 574 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 LRRC24Q50LG9 513 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 RRP12Q5JTH9 1297 aaKnown RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PRAMEF19Q5SWL8 479 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 SFMBT2Q5VUG0 894 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 NAA35Q5VZE5 725 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 C16orf59Q7L2K0 433 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 TSPYL5Q86VY4 417 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ZNF655Q8N720 491 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ZNF513Q8N8E2 541 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 CCDC197Q8NCU1 140 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 IFT81Q8WYA0 676 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 ARNTL2Q8WYA1 636 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 RCC1LQ96I51 464 aaKnown RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 EPSTI1Q96J88 318 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 CDK5RAP3Q96JB5 506 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 GLT1D1Q96MS3 346 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 GDAP1L1Q96MZ0 367 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 RAB3IPQ96QF0 476 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 LRRC1Q9BTT6 524 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 TRIM7Q9C029 511 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 TRIM6Q9C030 488 aaPredicted RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 GLT8D2Q9H1C3 349 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 IL23AQ9NPF7 189 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 INCENPQ9NQS7 918 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 CHST7Q9NS84 486 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 GFOD1Q9NXC2 390 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 LRP2BPQ9P2M1 347 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 HERC5Q9UII4 1024 aaKnown RBP5.25□□□□□ -1.57
LRCH3-214ENST00000473177 TBX21Q9UL17 535 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 KCNJ14Q9UNX9 436 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 PLXNB2O15031 1838 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 DOCK2Q92608 1830 aa5.25□□□□□ -1.57
LRCH3-214ENST00000473177 A0A1B0GUL6 1792 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 MACROD2A1Z1Q3 448 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 FAM221BA6H8Z2 402 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 ABLIM1O14639 778 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 TRAPPC3O43617 180 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 ORC4O43929 436 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 DTNBO60941 627 aa5.24□□□□□ -1.57
LRCH3-214ENST00000473177 RASSF9O75901 435 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms