RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 NR3C1P04150 777 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 PSMC1P62191 440 aaKnown RBP22.42■■□□□ 1.18
SREBF1-210ENST00000471445 CLDN10P78369 228 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 SDHAF4Q5VUM1 108 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 ZNF852Q6ZMS4 543 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 PARD3BQ8TEW8 1205 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 NELL2Q99435 816 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 MRPL45Q9BRJ2 306 aaKnown RBP22.42■■□□□ 1.18
SREBF1-210ENST00000471445 BCO2Q9BYV7 579 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 XYLT2Q9H1B5 865 aa22.42■■□□□ 1.18
SREBF1-210ENST00000471445 GFRA3O60609 400 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 ATP2C2O75185 946 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 TADA3O75528 432 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 FAM163BP0C2L3 166 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 ATICP31939 592 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 MAGEA11P43364 429 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 MYL6P60660 151 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 DDR2Q16832 855 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 TDRD10Q5VZ19 366 aaKnown RBP22.41■■□□□ 1.18
SREBF1-210ENST00000471445 C4orf50Q6ZRC1 276 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 C1orf210Q8IVY1 113 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 YAF2Q8IY57 180 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 ZNF687Q8N1G0 1237 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 CCDC47Q96A33 483 aaKnown RBP22.41■■□□□ 1.18
SREBF1-210ENST00000471445 CLDN23Q96B33 292 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 TRMT2BQ96GJ1 504 aaKnown RBP22.41■■□□□ 1.18
SREBF1-210ENST00000471445 LRRC3BQ96PB8 259 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 MMS19Q96T76 1030 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 SLC46A2Q9BY10 475 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 VRTNQ9H8Y1 702 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 TRAF3IP3Q9Y228 551 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 MRPS17Q9Y2R5 130 aaKnown RBP22.41■■□□□ 1.18
SREBF1-210ENST00000471445 PIAS3Q9Y6X2 628 aa22.41■■□□□ 1.18
SREBF1-210ENST00000471445 MAN2B1O00754 1011 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 DPYSL4O14531 572 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 ZNF202O95125 648 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 DDX6P26196 483 aaKnown RBP eCLIP22.4■■□□□ 1.181e-7■■■■■ 60
SREBF1-210ENST00000471445 AP3M2P53677 418 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 TNNC1P63316 161 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 TRPC3Q13507 836 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 MAPRE1Q15691 268 aaKnown RBP22.4■■□□□ 1.18
SREBF1-210ENST00000471445 WDR72Q3MJ13 1102 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 FRMD5Q7Z6J6 570 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 SYAP1Q96A49 352 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-210ENST00000471445 MYRFLQ96LU7 910 aa22.4■■□□□ 1.18
SREBF1-210ENST00000471445 UXTQ9UBK9 157 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-210ENST00000471445 MAGED2Q9UNF1 606 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-210ENST00000471445 SLC38A8A6NNN8 435 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 SOBPA7XYQ1 873 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 KIF20AO95235 890 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 C4BPAP04003 597 aaKnown RBP22.39■■□□□ 1.17
SREBF1-210ENST00000471445 RPS9P46781 194 aaKnown RBP22.39■■□□□ 1.17
SREBF1-210ENST00000471445 MLLT6P55198 1093 aaPredicted RBP22.39■■□□□ 1.17
SREBF1-210ENST00000471445 FZD5Q13467 585 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 BIRC3Q13489 604 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 KCNB1Q14721 858 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 NFIL3Q16649 462 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 ARHGAP29Q52LW3 1261 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 VSTM1Q6UX27 236 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 GPIHBP1Q8IV16 184 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 MAML2Q8IZL2 1156 aaPredicted RBP22.39■■□□□ 1.17
SREBF1-210ENST00000471445 CMTM8Q8IZV2 173 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 BPIFB1Q8TDL5 484 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 MSANTD3Q96H12 275 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 PCED1BQ96HM7 432 aa22.39■■□□□ 1.17
SREBF1-210ENST00000471445 MAGEC2Q9UBF1 373 aaPredicted RBP22.39■■□□□ 1.17
SREBF1-210ENST00000471445 PRR23AA6NEV1 266 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 NCAM2O15394 837 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 CALUO43852 315 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-210ENST00000471445 PDGFRBP09619 1106 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 ASCL5Q7RTU5 278 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 MYCBPAPQ8TBZ2 947 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 TMC2Q8TDI7 906 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 CSGALNACT1Q8TDX6 532 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 FAM3CQ92520 227 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 MRPS31Q92665 395 aaKnown RBP22.38■■□□□ 1.17
SREBF1-210ENST00000471445 SMG9Q9H0W8 520 aaKnown RBP22.38■■□□□ 1.17
SREBF1-210ENST00000471445 SNX25Q9H3E2 840 aa22.38■■□□□ 1.17
SREBF1-210ENST00000471445 MAPK13O15264 365 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 PHACTR2O75167 634 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 SP9P0CG40 484 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 GNL1P36915 607 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 DLG4P78352 724 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 NUCB2P80303 420 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 ZNF699Q32M78 642 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 SCN4BQ8IWT1 228 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 GUF1Q8N442 669 aaKnown RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 CELF5Q8N6W0 485 aaKnown RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 MAB21L3Q8N8X9 362 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 OR6B3Q8NGW1 331 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 NKD2Q969F2 451 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 CEP295NLQ96MC4 621 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 KIF9Q9HAQ2 790 aa22.37■■□□□ 1.17
SREBF1-210ENST00000471445 SPATA6Q9NWH7 488 aaPredicted RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 NXF1Q9UBU9 619 aaKnown RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 NDRG2Q9UN36 371 aaKnown RBP22.37■■□□□ 1.17
SREBF1-210ENST00000471445 MYO15AQ9UKN7 3530 aa22.36■■□□□ 1.17
SREBF1-210ENST00000471445 VNN1O95497 513 aa22.36■■□□□ 1.17
SREBF1-210ENST00000471445 BDNFP23560 247 aa22.36■■□□□ 1.17
SREBF1-210ENST00000471445 AVPR1AP37288 418 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms