RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 FAM171BQ6P995 826 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 DPH6Q7L8W6 267 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 IQUBQ8NA54 791 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
CPSF4-210ENST00000469897 C7orf25Q9BPX7 421 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 CUEDC2Q9H467 287 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 FBRSL1Q9HCM7 1045 aaKnown RBP14.24□□□□□ -0.13
CPSF4-210ENST00000469897 TRPC7Q9HCX4 862 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 ABCB6Q9NP58 842 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 PARD6AQ9NPB6 346 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 ZMYM5Q9UJ78 669 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 GMEB2Q9UKD1 530 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 RAB23Q9ULC3 237 aa14.24□□□□□ -0.13
CPSF4-210ENST00000469897 RIF1Q5UIP0 2472 aaKnown RBP14.24□□□□□ -0.13
CPSF4-210ENST00000469897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-210ENST00000469897 MED19A0JLT2 244 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-210ENST00000469897 SOBPA7XYQ1 873 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 CLIC2O15247 247 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 TGFB1I1O43294 461 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 NOL4O94818 638 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 ARSAP15289 507 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 PCSK1P29120 753 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 CASP1P29466 404 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 GALK1P51570 392 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 PSMC1P62191 440 aaKnown RBP14.23□□□□□ -0.13
CPSF4-210ENST00000469897 SPEM2Q0P670 501 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 CFAP221Q4G0U5 840 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 CC2D1AQ6P1N0 951 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-210ENST00000469897 EPM2AIP1Q7L775 607 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-210ENST00000469897 TRAPPC11Q7Z392 1133 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 LIMS2Q7Z4I7 341 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 LONP2Q86WA8 852 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 NELFCDQ8IXH7 590 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 SYNPOQ8N3V7 929 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 KBTBD7Q8WVZ9 684 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 MYRFLQ96LU7 910 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 SLC22A12Q96S37 553 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 MMS19Q96T76 1030 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 BLZF1Q9H2G9 400 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 KIAA1586Q9HCI6 787 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 AGPAT3Q9NRZ7 376 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 MAGEC2Q9UBF1 373 aaPredicted RBP14.23□□□□□ -0.13
CPSF4-210ENST00000469897 USP18Q9UMW8 372 aa14.23□□□□□ -0.13
CPSF4-210ENST00000469897 EIF3DO15371 548 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 POLR2DO15514 142 aaKnown RBP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 YEATS4O95619 227 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 DLATP10515 647 aaKnown RBP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 TNNI1P19237 187 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 BDNFP23560 247 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 PXNP49023 591 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 CYP2J2P51589 502 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 ATXN1P54253 815 aaKnown RBP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 TMEM196Q5HYL7 178 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 FAM26FQ5R3K3 315 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 LAIR1Q6GTX8 287 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 FSTL4Q6MZW2 842 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 PKN3Q6P5Z2 889 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 WDR49Q8IV35 697 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 SPATA18Q8TC71 538 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 CCDC127Q96BQ5 260 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 CHFRQ96EP1 664 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 TRMT2BQ96GJ1 504 aaKnown RBP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 SYT15Q9BQS2 421 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 KIF9Q9HAQ2 790 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 CRTAC1Q9NQ79 661 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 UXTQ9UBK9 157 aaPredicted RBP14.22□□□□□ -0.13
CPSF4-210ENST00000469897 CDH9Q9ULB4 789 aa14.22□□□□□ -0.13
CPSF4-210ENST00000469897 CITO14578 2027 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 TRDMT1O14717 391 aaKnown RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 TADA3O75528 432 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 RETP07949 1114 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 CNR2P34972 360 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 GNL1P36915 607 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 GRIK1P39086 918 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 GRSF1Q12849 480 aaKnown RBP eCLIP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 ZNF268Q14587 947 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 SNRNP35Q16560 246 aaKnown RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 NAIF1Q69YI7 327 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 CNNM4Q6P4Q7 775 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 C4orf50Q6ZRC1 276 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 ARL14EPQ8N8R7 260 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 SCFD1Q8WVM8 642 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 ZNF516Q92618 1163 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 MYLPFQ96A32 169 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 FUBP3Q96I24 572 aaKnown RBP eCLIP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 MRPL45Q9BRJ2 306 aaKnown RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 LINC00597Q9H2U6 94 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 SNX25Q9H3E2 840 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 SLC39A2Q9NP94 309 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 POLR3BQ9NW08 1133 aaPredicted RBP14.21□□□□□ -0.13
CPSF4-210ENST00000469897 PCDHA7Q9UN72 937 aa14.21□□□□□ -0.13
CPSF4-210ENST00000469897 TRAV19A0A0A6YYK7 116 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 C2orf78A6NCI8 922 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 PRR5-ARHGAP8B1AHC4 643 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 EGFP01133 1207 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 CKMP06732 381 aa14.2□□□□□ -0.14
CPSF4-210ENST00000469897 ZSCAN22P10073 491 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms