RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 NELFCDQ8IXH7 590 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SYCP3Q8IZU3 236 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 XXYLT1Q8NBI6 393 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 NAP1L5Q96NT1 182 aaPredicted RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 MAP7D2Q96T17 732 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 TUBGCP2Q9BSJ2 902 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 NUP58Q9BVL2 599 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 XPO4Q9C0E2 1151 aaKnown RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 ADAMTS10Q9H324 1103 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 IFT122Q9HBG6 1241 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 POLD4Q9HCU8 107 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 PTPRHQ9HD43 1115 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SETD4Q9NVD3 440 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 PRMT7Q9NVM4 692 aaPredicted RBP5.96□□□□□ -1.46
VPS41-211ENST00000466017 IFNKQ9P0W0 207 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 HDAC6Q9UBN7 1215 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 TNFSF13BQ9Y275 285 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 PTCH2Q9Y6C5 1203 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 SQORQ9Y6N5 450 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 ADGRA3Q8IWK6 1321 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 EVPLQ92817 2033 aa5.96□□□□□ -1.46
VPS41-211ENST00000466017 ZMYM2Q9UBW7 1377 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ZSWIM8A7E2V4 1837 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 A0A0B4J269 797 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 MYADML2A6NDP7 307 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 LRRIQ4A6NIV6 560 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ANKRD63C9JTQ0 380 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 DNM1LO00429 736 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 N4BP3O15049 544 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 TOM1L1O75674 476 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 AKAP3O75969 853 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 BPNT1O95861 308 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 PGK1P00558 417 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ADRB2P07550 413 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ZNF286BP0CG31 522 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 HSPA8P11142 646 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 CYP2C9P11712 490 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 SFPQP23246 707 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS41-211ENST00000466017 ADSSP30520 456 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 MTIF2P46199 727 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 CTCFP49711 727 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 CDK7P50613 346 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 CLCN3P51790 818 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ACLYP53396 1101 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 CRYBB1P53674 252 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 SOX10P56693 466 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 GSDMDP57764 484 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 MCL1Q07820 350 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 RBL2Q08999 1139 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 TBX2Q13207 712 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 TRIM14Q14142 442 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 MIIPQ5JXC2 388 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ARMCX5Q6P1M9 558 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 SLC39A4Q6P5W5 647 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 FBXO46Q6PJ61 603 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 TSHZ1Q6ZSZ6 1077 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 INTS8Q75QN2 995 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 TRMT1LQ7Z2T5 733 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 CTU1Q7Z7A3 348 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 USP37Q86T82 979 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 SERINC5Q86VE9 423 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 RHPN2Q8IUC4 686 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 VSTM4Q8IW00 320 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 MFSD4AQ8N468 514 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 LRRC71Q8N4P6 559 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 C7orf31Q8N865 590 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 USP38Q8NB14 1042 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 RNF149Q8NC42 400 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 LRRN4CLQ8ND94 238 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 LMBR1Q8WVP7 490 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 UBE2FQ969M7 185 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ARMC5Q96C12 935 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 VWCEQ96DN2 955 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 CNOT6LQ96LI5 555 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 GLT1D1Q96MS3 346 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 TSPAN18Q96SJ8 248 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ACO2Q99798 780 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 LRRC3Q9BY71 257 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 MRPL4Q9BYD3 311 aaKnown RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 GCOM2Q9BZD3 368 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS41-211ENST00000466017 DUSP15Q9H1R2 295 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 NDST4Q9H3R1 872 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 ARMCX3Q9UH62 379 aaPredicted RBP5.95□□□□□ -1.46
VPS41-211ENST00000466017 FBXL5Q9UKA1 691 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 FRMD4BQ9Y2L6 1034 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 COQ4Q9Y3A0 265 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.95□□□□□ -1.463e-7■■□□□ 12.1
VPS41-211ENST00000466017 GRIN2DO15399 1336 aa5.95□□□□□ -1.46
VPS41-211ENST00000466017 A0A087WZ62 844 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 A0A1B0GUA9 196 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 SHISA3A0PJX4 238 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 ZNF233A6NK53 670 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 ARVCFO00192 962 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 ABLIM1O14639 778 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 CLIC2O15247 247 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 CLDN3O15551 220 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 TEX33O43247 280 aa5.94□□□□□ -1.46
VPS41-211ENST00000466017 EXTL3O43909 919 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms