RNA–Protein interactions for RNA: ENST00000457748.1

GTF3C2-208, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-208ENST00000457748 SPPL2BQ8TCT7 592 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 ZNF606Q8WXB4 792 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 PCED1BQ96HM7 432 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 LRCH3Q96II8 777 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 PANX2Q96RD6 677 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 GAS2L1Q99501 681 aaPredicted RBP13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 HNRNPABQ99729 332 aaKnown RBP13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 LPIN3Q9BQK8 851 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 B3GNT5Q9BYG0 378 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 TLE6Q9H808 572 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 MAFFQ9ULX9 164 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 NME7Q9Y5B8 376 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 PCDHGC5Q9Y5F6 944 aa13.21□□□□□ -0.29
GTF3C2-208ENST00000457748 WDR27A2RRH5 827 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 M0QYV0 167 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 SOX1O00570 391 aaPredicted RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 PRRG1O14668 218 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 ADAM12O43184 909 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 AP1G2O75843 785 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 CALCAP01258 141 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 SKILP12757 684 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 BDNFP23560 247 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 ANXA13P27216 316 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 GRIK1P39086 918 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 CDR1P51861 262 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 CDR2Q01850 454 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 CAMK1Q14012 370 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 PPP1R26Q5T8A7 1209 aaPredicted RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 ARHGAP17Q68EM7 881 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 LCLAT1Q6UWP7 414 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 RBM23Q86U06 439 aaKnown RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 LRRTM3Q86VH5 581 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 EPS8L1Q8TE68 723 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 FAM161BQ96MY7 647 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 NOX5Q96PH1 765 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 SEPT5Q99719 369 aaPredicted RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 TTYH1Q9H313 450 aaPredicted RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 HAUS4Q9H6D7 363 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 ABCB6Q9NP58 842 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 ACP6Q9NPH0 428 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 TSPAN16Q9UKR8 245 aa13.2□□□□□ -0.3
GTF3C2-208ENST00000457748 COL4A4P53420 1690 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 MTMR11A4FU01 709 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 O00370 1275 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CLDN5O00501 218 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 TRIM66O15016 1216 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 MICAL2O94851 1124 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 ATF2P15336 505 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 IGFBP4P22692 258 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 HNRNPH3P31942 346 aaKnown RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 PRKCIP41743 596 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 ALDH1A3P47895 512 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 TUFMP49411 452 aaKnown RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 BCAT1P54687 386 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 GRIN2CQ14957 1233 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 MGAT5BQ3V5L5 792 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CFAP221Q4G0U5 840 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CYP26C1Q6V0L0 522 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CCDC149Q6ZUS6 474 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 FAM35AQ86V20 835 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 ATAD1Q8NBU5 361 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 MSANTD4Q8NCY6 345 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 TFAP2BQ92481 460 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CCDC42Q96M95 316 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 PKMYT1Q99640 499 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 ZNF518BQ9C0D4 1074 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 CYP4F11Q9HBI6 524 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 NOCTQ9UK39 431 aaKnown RBP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
GTF3C2-208ENST00000457748 PER2O15055 1255 aa13.18□□□□□ -0.3
GTF3C2-208ENST00000457748 TGM5O43548 720 aa13.18□□□□□ -0.3
GTF3C2-208ENST00000457748 AKR1B10O60218 316 aa13.18□□□□□ -0.3
GTF3C2-208ENST00000457748 CLASP2O75122 1294 aaKnown RBP13.18□□□□□ -0.3
GTF3C2-208ENST00000457748 ABLIM3O94929 683 aa13.18□□□□□ -0.3
GTF3C2-208ENST00000457748 LSM8O95777 96 aaKnown RBP13.18□□□□□ -0.3
GTF3C2-208ENST00000457748 MMEP08473 750 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms