RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CPPED1Q9BRF8 314 aaPredicted RBP5.16□□□□□ -1.58
LINC00393-202ENST00000452852 LSM14BQ9BX40 385 aaKnown RBP5.16□□□□□ -1.58
LINC00393-202ENST00000452852 ANAPC4Q9UJX5 808 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 GTF2A1LQ9UNN4 478 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 PCDHGB2Q9Y5G2 931 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 PCDHA3Q9Y5H8 950 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 PEAK1Q9H792 1746 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 ABCC6O95255 1503 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 TTC21BQ7Z4L5 1316 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 RPTORQ8N122 1335 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 TTC21AQ8NDW8 1320 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 KTN1Q86UP2 1357 aaKnown RBP5.16□□□□□ -1.58
LINC00393-202ENST00000452852 TONSLQ96HA7 1378 aa5.16□□□□□ -1.58
LINC00393-202ENST00000452852 CPSF1Q10570 1443 aaKnown RBP5.15□□□□□ -1.58
LINC00393-202ENST00000452852 FZD7O75084 574 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 KITP10721 976 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 HK1P19367 917 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 ADSLP30566 484 aaPredicted RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 STT3AP46977 705 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 HK3P52790 923 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 GPSM2P81274 684 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 APBA1Q02410 837 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 TNFAIP2Q03169 654 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 FOXD4Q12950 439 aaPredicted RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 NOGQ13253 232 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 FGL2Q14314 439 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 ELF2Q15723 593 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 LSM12Q3MHD2 195 aaKnown RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 IZUMO3Q5VZ72 239 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 IGFL4Q6B9Z1 124 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 TTC7BQ86TV6 843 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 FAM83AQ86UY5 434 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 XYLT1Q86Y38 959 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 MYCT1Q8N699 235 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 NSUN6Q8TEA1 469 aaKnown RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 CLPTM1LQ96KA5 538 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 CDC5LQ99459 802 aaKnown RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 VRK1Q99986 396 aaPredicted RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 LRRC27Q9C0I9 530 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 SCAND2PQ9GZW5 306 aaPredicted RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 KIAA1586Q9HCI6 787 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 RBM12Q9NTZ6 932 aaKnown RBP5.15□□□□□ -1.59
LINC00393-202ENST00000452852 PARPBPQ9NWS1 579 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 SAGE1Q9NXZ1 904 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 GPRC5DQ9NZD1 345 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 CPA4Q9UI42 421 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 HS3ST3A1Q9Y663 406 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 WDR17Q8IZU2 1322 aa5.15□□□□□ -1.59
LINC00393-202ENST00000452852 NFAT5O94916 1531 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 POM121BA6NF01 834 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 GOLGA6L6A8MZA4 724 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 AKR1B10O60218 316 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 ACVRL1P37023 503 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 IL12RB1P42701 662 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 MAPK10P53779 464 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 NKX6-1P78426 367 aaPredicted RBP5.14□□□□□ -1.59
LINC00393-202ENST00000452852 MGAT2Q10469 447 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 TOB2Q14106 344 aaPredicted RBP5.14□□□□□ -1.59
LINC00393-202ENST00000452852 PLS1Q14651 629 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 PDCD2Q16342 344 aaPredicted RBP5.14□□□□□ -1.59
LINC00393-202ENST00000452852 SLC4A8Q2Y0W8 1093 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 KHDC1Q4VXA5 237 aaKnown RBP5.14□□□□□ -1.59
LINC00393-202ENST00000452852 DGKKQ5KSL6 1271 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 WDR78Q5VTH9 848 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 PPP4R3AQ6IN85 833 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 CCDC70Q6NSX1 233 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 HTR3DQ70Z44 454 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 HEATR3Q7Z4Q2 680 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC00393-202ENST00000452852 C3orf20Q8ND61 904 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 GPR156Q8NFN8 814 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 IL31RAQ8NI17 732 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 MDM1Q8TC05 714 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 SLC35A4Q96G79 324 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 DMRTA2Q96SC8 542 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 PDCD2LQ9BRP1 358 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 CPEB1Q9BZB8 566 aaKnown RBP5.14□□□□□ -1.59
LINC00393-202ENST00000452852 BTBD1Q9H0C5 482 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 LMBRD1Q9NUN5 540 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 HDAC5Q9UQL6 1122 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 NHSQ6T4R5 1651 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 CCDC7Q96M83 1385 aa5.14□□□□□ -1.59
LINC00393-202ENST00000452852 A0A087WV62 115 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 A0A1W2PPL8 197 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 hCG_1642624A0A1W2PR95 340 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 F8W8V4 182 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 EXOC5O00471 708 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 PHGDHO43175 533 aaKnown RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 ADCY6O43306 1168 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 NARSO43776 548 aaKnown RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 PHF2O75151 1096 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 GASTP01350 101 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 SLC7A1P30825 629 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 GDF5P43026 501 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 SLC25A3Q00325 362 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 TUBA3CQ13748 450 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 MST1LQ2TV78 715 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 CCDC38Q502W7 563 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 DCAF17Q5H9S7 520 aaPredicted RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 THEMIS2Q5TEJ8 643 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms