RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 MEFVO15553 781 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 TRAPPC3O43617 180 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 RNF8O76064 485 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 STAU1O95793 577 aaKnown RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 HMGCRP04035 888 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 RFC1P35251 1148 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 CDKN2BP42772 138 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 ARSEP51690 589 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 YARSP54577 528 aaKnown RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 VCPP55072 806 aaKnown RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 IFI35P80217 286 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 MYO1EQ12965 1108 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 ACVR2BQ13705 512 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 GRB14Q14449 540 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 ACAP1Q15027 740 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 STILQ15468 1287 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 CNGA2Q16280 664 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 LONRF1Q17RB8 773 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 MAP1SQ66K74 1059 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 TXNRD3NBQ6F5E7 133 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 MFSD5Q6N075 450 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 HIBCHQ6NVY1 386 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 CATSPER4Q7RTX7 472 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 RFX6Q8HWS3 928 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 TMEM130Q8N3G9 435 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 ALLCQ8N6M5 410 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 CPXM1Q96SM3 734 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 FRMD8P1Q9BZ68 369 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 FAM124BQ9H5Z6 455 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 GBA2Q9HCG7 927 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 TJP2Q9UDY2 1190 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 HMGXB4Q9UGU5 601 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 CYTH4Q9UIA0 394 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 KIAA1257Q9ULG3 409 aa10.98□□□□□ -0.65
CPNE1-218ENST00000439806 BARX2Q9UMQ3 279 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 ATXN2Q99700 1313 aaKnown RBP10.98□□□□□ -0.65
CPNE1-218ENST00000439806 A0A1B0GUA9 196 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 SLC15A5A6NIM6 579 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 ITGAVP06756 1048 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 DESP17661 470 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 GPD1P21695 349 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 MMP13P45452 471 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 GABRB2P47870 512 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 NDST1P52848 882 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 DYNLT1P63172 113 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 FKBP1BP68106 108 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 CDC42EP1Q00587 391 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 PLCB3Q01970 1234 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 SLC25A11Q02978 314 aaKnown RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 INCA1Q0VD86 236 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 GPS1Q13098 491 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 STAT4Q14765 748 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 KYNUQ16719 465 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 FAM110CQ1W6H9 321 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 SMTNL2Q2TAL5 461 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 GOLGA7BQ2TAP0 167 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 ERMARDQ5T6L9 678 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 FAM102AQ5T9C2 384 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 OR6B2Q6IFH4 312 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 CPLX4Q7Z7G2 160 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 PRUNE1Q86TP1 453 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 ZCCHC9Q8N567 271 aaKnown RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 EMC1Q8N766 993 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 C2orf69Q8N8R5 385 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 BEST2Q8NFU1 509 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 NPLOC4Q8TAT6 608 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 UBA3Q8TBC4 463 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 MDM1Q8TC05 714 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 NKD2Q969F2 451 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 MCRS1Q96EZ8 462 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 TTC25Q96NG3 672 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 TINF2Q9BSI4 451 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 NSRP1Q9H0G5 558 aaKnown RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 FAM49AQ9H0Q0 323 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 RASSF4Q9H2L5 321 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 PCDH9Q9HC56 1237 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 SAYSD1Q9NPB0 183 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 INTS9Q9NV88 658 aaKnown RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 TPX2Q9ULW0 747 aaKnown RBP10.97□□□□□ -0.65
CPNE1-218ENST00000439806 EFR3BQ9Y2G0 817 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 DERAQ9Y315 318 aa10.97□□□□□ -0.65
CPNE1-218ENST00000439806 SCN1AP35498 2009 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 A0A087WUV0 522 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-218ENST00000439806 TP73O15350 636 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 CST8O60676 142 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 LRCH4O75427 683 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 HOXD8P13378 290 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-218ENST00000439806 KDELR1P24390 212 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 GPD2P43304 727 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 MAGEA4P43358 317 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 MAGEA9P43362 315 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 OTUD4Q01804 1114 aaKnown RBP10.96□□□□□ -0.65
CPNE1-218ENST00000439806 MORF4L2Q15014 288 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 GPR162Q16538 588 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 CCDC38Q502W7 563 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 BBS12Q6ZW61 710 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
CPNE1-218ENST00000439806 RELL1Q8IUW5 271 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms