RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 HINFPQ9BQA5 517 aa23.34■■□□□ 1.33
VSX1-205ENST00000429762 DDX43Q9NXZ2 648 aaKnown RBP23.34■■□□□ 1.33
VSX1-205ENST00000429762 ATP11BQ9Y2G3 1177 aa23.34■■□□□ 1.33
VSX1-205ENST00000429762 MIF4GDA9UHW6 222 aaKnown RBP23.33■■□□□ 1.33
VSX1-205ENST00000429762 CLDN5O00501 218 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 ENPP3O14638 875 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 DDHD2O94830 711 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 EOMESO95936 686 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 CTNNA1P35221 906 aaKnown RBP23.33■■□□□ 1.33
VSX1-205ENST00000429762 GJC1P36383 396 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 LBX1P52954 281 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 TAS2R40P59535 323 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 PDE4CQ08493 712 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 ARHGAP17Q68EM7 881 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 FBXO38Q6PIJ6 1188 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 DEFB128Q7Z7B8 93 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 EMC1Q8N766 993 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 B3GALNT2Q8NCR0 500 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 PIWIL1Q96J94 861 aaKnown RBP23.33■■□□□ 1.33
VSX1-205ENST00000429762 RNPC3Q96LT9 517 aaKnown RBP23.33■■□□□ 1.33
VSX1-205ENST00000429762 FTHL17Q9BXU8 183 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 PARD6BQ9BYG5 372 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 HESX1Q9UBX0 185 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 STRIP2Q9ULQ0 834 aa23.33■■□□□ 1.33
VSX1-205ENST00000429762 PGRMC1O00264 195 aaKnown RBP23.32■■□□□ 1.32
VSX1-205ENST00000429762 CTNNA2P26232 953 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 SSR1P43307 286 aaKnown RBP23.32■■□□□ 1.32
VSX1-205ENST00000429762 LLGL1Q15334 1064 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 KCTD19Q17RG1 926 aaPredicted RBP23.32■■□□□ 1.32
VSX1-205ENST00000429762 NOMO2Q5JPE7 1267 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 ANKRD33Q7Z3H0 272 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 RASGEF1CQ8N431 466 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 GPR161Q8N6U8 529 aaKnown RBP23.32■■□□□ 1.32
VSX1-205ENST00000429762 ACTRT1Q8TDG2 376 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 SEPT8Q92599 483 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 RPGRIP1Q96KN7 1286 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 PLEKHA4Q9H4M7 779 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 RNF14Q9UBS8 474 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 TSC2P49815 1807 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 TCF4P15884 667 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 RFC1P35251 1148 aaPredicted RBP23.32■■□□□ 1.32
VSX1-205ENST00000429762 STILQ15468 1287 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 MDH1BQ5I0G3 518 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 FAM183BPQ6ZVS7 135 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.32■■□□□ 1.32
VSX1-205ENST00000429762 PCDHA3Q9Y5H8 950 aa23.32■■□□□ 1.32
VSX1-205ENST00000429762 DCDC2CA8MYV0 355 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 GABRDO14764 452 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 GABBR2O75899 941 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 FGGP02679 453 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 PYGMP11217 842 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 OR6B2Q6IFH4 312 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 MSANTD4Q8NCY6 345 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 IPO4Q8TEX9 1081 aaKnown RBP23.31■■□□□ 1.32
VSX1-205ENST00000429762 CARD9Q9H257 536 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 IP6K2Q9UHH9 426 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 F8VP50 259 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 INPPL1O15357 1258 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 KRT3P12035 628 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 PTPN1P18031 435 aaKnown RBP23.31■■□□□ 1.32
VSX1-205ENST00000429762 GABRB2P47870 512 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 AARSP49588 968 aaKnown RBP eCLIP23.31■■□□□ 1.32
VSX1-205ENST00000429762 FAM102AQ5T9C2 384 aaPredicted RBP23.31■■□□□ 1.32
VSX1-205ENST00000429762 KLHL7Q8IXQ5 586 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 MMGT1Q8N4V1 131 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 DDX27Q96GQ7 796 aaKnown RBP23.31■■□□□ 1.32
VSX1-205ENST00000429762 TNIP3Q96KP6 325 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 LRRC1Q9BTT6 524 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 CRTAC1Q9NQ79 661 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 TBC1D13Q9NVG8 400 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 DNAJB4Q9UDY4 337 aa23.31■■□□□ 1.32
VSX1-205ENST00000429762 CCDC66A2RUB6 948 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 GRAP2O75791 330 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 RABGGTBP53611 331 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 LONRF2Q1L5Z9 754 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 URGCPQ8TCY9 931 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 HDAC7Q8WUI4 952 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 SLC35F5Q8WV83 523 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 MCRS1Q96EZ8 462 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 KLHL11Q9NVR0 708 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 TMEM161AQ9NX61 479 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 HCSTQ9UBK5 93 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 NR2E1Q9Y466 385 aa23.3■■□□□ 1.32
VSX1-205ENST00000429762 SIGLEC16A6NMB1 481 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 ZMYND10O75800 440 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 COL6A1P12109 1028 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 SLC1A1P43005 524 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 RNASELQ05823 741 aaKnown RBP23.29■■□□□ 1.32
VSX1-205ENST00000429762 ZNF268Q14587 947 aaPredicted RBP23.29■■□□□ 1.32
VSX1-205ENST00000429762 FUKQ8N0W3 1084 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 ANKRD52Q8NB46 1076 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.29■■□□□ 1.32
VSX1-205ENST00000429762 KRT12Q99456 494 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 SYT15Q9BQS2 421 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 B3GNT5Q9BYG0 378 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 PCDHB7Q9Y5E2 793 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 SLC7A5Q01650 507 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 ITIH3Q06033 890 aa23.29■■□□□ 1.32
VSX1-205ENST00000429762 BST2Q10589 180 aaKnown RBP23.29■■□□□ 1.32
VSX1-205ENST00000429762 ARMC5Q96C12 935 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms