RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 AKAP17AQ02040 695 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GUCY1A3Q02108 690 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GHRHRQ02643 423 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TBC1D8BQ0IIM8 1120 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CCINQ13939 588 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 STARD3Q14849 445 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 POSTNQ15063 836 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PGM5Q15124 567 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TAF5Q15542 800 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PFKFB3Q16875 520 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TBC1D25Q3MII6 688 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 FAM209BQ5JX69 171 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TMEM201Q5SNT2 666 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CFAP58Q5T655 872 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 BROXQ5VW32 411 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 AP1ARQ63HQ0 302 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TAPT1Q6NXT6 567 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PGBD2Q6P3X8 592 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 LRFN4Q6PJG9 635 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 SEPT14Q6ZU15 432 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 RFX8Q6ZV50 586 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 NEK10Q6ZWH5 1172 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 USP53Q70EK8 1073 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 MTDHQ86UE4 582 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TLK2Q86UE8 772 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PDZD3Q86UT5 571 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 HEATR4Q86WZ0 1026 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TMTC1Q8IUR5 882 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CCDC83Q8IWF9 413 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TRIM59Q8IWR1 403 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TMEM192Q8IY95 271 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 KIAA0319LQ8IZA0 1049 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ARL6IP6Q8N6S5 226 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 DNERQ8NFT8 737 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 SMARCC2Q8TAQ2 1214 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ADAMTS18Q8TE60 1221 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CUL5Q93034 780 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GTF3C6Q969F1 213 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 MVB12AQ96EY5 273 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ZNF274Q96GC6 653 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 SPAG5Q96R06 1193 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 SDF4Q9BRK5 362 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PDCD2LQ9BRP1 358 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 TMEM120AQ9BXJ8 343 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 RNF26Q9BY78 433 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 MRPL9Q9BYD2 267 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GBP3Q9H0R5 595 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ELAC1Q9H777 363 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 PSTPIP2Q9H939 334 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 WASH6PQ9NQA3 447 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 XPNPEP3Q9NQH7 507 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 KCND1Q9NSA2 647 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GJB4Q9NTQ9 266 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 CCM2LQ9NUG4 571 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 BARHL2Q9NY43 387 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 H2AFY2Q9P0M6 372 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GRHPRQ9UBQ7 328 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 ADD3Q9UEY8 706 aaKnown RBP4.92□□□□□ -1.62
SF3B1-202ENST00000409915 OGDHLQ9ULD0 1010 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 GPR34Q9UPC5 381 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 FHOD1Q9Y613 1164 aa4.92□□□□□ -1.62
SF3B1-202ENST00000409915 A0A087WUV0 522 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 A0A1W2PNR3 127 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 SMCO2A6NFE2 343 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 B4DLN1 442 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 KBTBD13C9JR72 458 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 RBAK-RBAKDNI3L0D1 243 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 P4HA2O15460 535 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 MGEA5O60502 916 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 MSCO60682 206 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ADAMTS4O75173 837 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ARHGEF15O94989 841 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 MBD3O95983 291 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ACTN2P35609 894 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 SOX18P35713 384 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 KCNJ6P48051 423 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 RPS6KA3P51812 740 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ADCY7P51828 1080 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ADKP55263 362 aaKnown RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 GFRA1P56159 465 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ARL4CP56559 192 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 MRPS9P82933 396 aaKnown RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 MAP4K2Q12851 820 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 INPP5AQ14642 412 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 SMC1AQ14683 1233 aaKnown RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 PPP2R5BQ15173 497 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ANKRD1Q15327 319 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 CNN3Q15417 329 aaKnown RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 SLC14A2Q15849 920 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 MEA1Q16626 185 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 LY6KQ17RY6 165 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ZNF423Q2M1K9 1284 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 HSF5Q4G112 596 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 IQCEQ6IPM2 695 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 NPNTQ6UXI9 565 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 BRSK2Q8IWQ3 736 aa4.91□□□□□ -1.62
SF3B1-202ENST00000409915 ZC3H7AQ8IWR0 971 aaKnown RBP4.91□□□□□ -1.62
SF3B1-202ENST00000409915 C7orf31Q8N865 590 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms