RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.71■□□□□ 0.43
NUP50-203ENST00000407019 ASB14A6NK59 587 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 SNX3O60493 162 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 ERBB2P04626 1255 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 IL1R2P27930 398 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 ATICP31939 592 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 POU5F1BQ06416 359 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 SF3A3Q12874 501 aaKnown RBP eCLIP17.71■□□□□ 0.43
NUP50-203ENST00000407019 MPP2Q14168 576 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 ZNF268Q14587 947 aaPredicted RBP17.71■□□□□ 0.43
NUP50-203ENST00000407019 ARHGEF18Q6ZSZ5 1173 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
NUP50-203ENST00000407019 SUGP1Q8IWZ8 645 aaKnown RBP17.71■□□□□ 0.43
NUP50-203ENST00000407019 TTC13Q8NBP0 860 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 TWNKQ96RR1 684 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 ELOVL4Q9GZR5 314 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 CYP3A43Q9HB55 503 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 MLXIPLQ9NP71 852 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.43
NUP50-203ENST00000407019 CILPO75339 1184 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 MICAL2O94851 1124 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 IFNB1P01574 187 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 INSRRP14616 1297 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 DYNLT1P63172 113 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 PDE4CQ08493 712 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 NR1H3Q13133 447 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 CCDC142Q17RM4 750 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 KCNT1Q5JUK3 1230 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 BBS12Q6ZW61 710 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 CENPUQ71F23 418 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 GDAP1Q8TB36 358 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 CDCA5Q96FF9 252 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 TMEM176AQ96HP8 235 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 PDZD7Q9H5P4 517 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 ASB7Q9H672 318 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 SLC40A1Q9NP59 571 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 A0A087WZ62 844 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 RASA4BC9J798 803 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 M0QYV0 167 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 RASA4O43374 803 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 CST8O60676 142 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 OAS1P00973 400 aaKnown RBP17.7■□□□□ 0.42
NUP50-203ENST00000407019 P4HA1P13674 534 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 KDELR1P24390 212 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 STX2P32856 288 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 OTUD4Q01804 1114 aaKnown RBP17.7■□□□□ 0.42
NUP50-203ENST00000407019 ARHGAP1Q07960 439 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 FASTKD3Q14CZ7 662 aaKnown RBP17.7■□□□□ 0.42
NUP50-203ENST00000407019 TAZQ16635 292 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 AMHR2Q16671 573 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 ARMCX2Q7L311 632 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 PCGF5Q86SE9 256 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 TDRPQ86YL5 185 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 IFNLR1Q8IU57 520 aaPredicted RBP17.7■□□□□ 0.42
NUP50-203ENST00000407019 KIAA0319LQ8IZA0 1049 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 TMEM130Q8N3G9 435 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 EMC1Q8N766 993 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 MAML1Q92585 1016 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 PRCCQ92733 491 aaPredicted RBP17.7■□□□□ 0.42
NUP50-203ENST00000407019 OPTNQ96CV9 577 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 FDXACB1Q9BRP7 624 aaPredicted RBP17.7■□□□□ 0.42
NUP50-203ENST00000407019 VRTNQ9H8Y1 702 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 FGFR1OP2Q9NVK5 253 aa17.7■□□□□ 0.42
NUP50-203ENST00000407019 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.7■□□□□ 0.42
NUP50-203ENST00000407019 ALOX15BO15296 676 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 RASSF9O75901 435 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 GH1P01241 217 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 LGALS2P05162 132 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 LAMC2Q13753 1193 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 NUGGCQ68CJ6 796 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 SHCBP1Q8NEM2 672 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 CXorf38Q8TB03 319 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 MCRS1Q96EZ8 462 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 PPP1R16BQ96T49 567 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 VPS37BQ9H9H4 285 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 USP15Q9Y4E8 981 aaPredicted RBP17.69■□□□□ 0.42
NUP50-203ENST00000407019 MGAMO43451 1857 aa17.69■□□□□ 0.42
NUP50-203ENST00000407019 MAGEB2O15479 319 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 CSDE1O75534 798 aaKnown RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 DNAJC8O75937 253 aaPredicted RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 ITGBL1O95965 494 aaPredicted RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 GSTA1P08263 222 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 GCAP28676 217 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 GABRB2P47870 512 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 MYO1EQ12965 1108 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 MKRN3Q13064 507 aaKnown RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 ACAP1Q15027 740 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 TRPM8Q7Z2W7 1104 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 ZBED8Q8IZ13 594 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 CPB2Q96IY4 423 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 SAE1Q9UBE0 346 aaPredicted RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 AKT3Q9Y243 479 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 FARP1Q9Y4F1 1045 aaPredicted RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 MCM3APO60318 1980 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 VDRP11473 427 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms