RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 KYAT1Q16773 422 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 MPP4Q96JB8 637 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 FAM8A1Q9UBU6 413 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 TRPC5OSA6NMA1 111 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 MMP10P09238 476 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 DRD4P21917 467 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 COG2Q14746 738 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 MTFR1Q15390 333 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 CNGA2Q16280 664 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 TRIM16LQ309B1 348 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 UBA3Q8TBC4 463 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 PPP4CP60510 307 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 KCNJ2P63252 427 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 CLEC16AQ2KHT3 1053 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 TCP10LQ8TDR4 215 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 INPP5DQ92835 1189 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 OXNAD1Q96HP4 312 aaPredicted RBP16.56■□□□□ 0.24
COL17A1-202ENST00000369733 RUBCNLQ9H714 662 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 RBP5P82980 135 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 PRKCEQ02156 737 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 STX5Q13190 355 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 NFIXQ14938 502 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 PDK1Q15118 436 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 SLC10A5Q5PT55 438 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF720Q7Z2F6 126 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 B4GALNT2Q8NHY0 566 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 USP33Q8TEY7 942 aa16.56■□□□□ 0.24
COL17A1-202ENST00000369733 HSD17B4P51659 736 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 MCL1Q07820 350 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 USP6NLQ92738 828 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 EFCAB1Q9HAE3 211 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 ADGRA3Q8IWK6 1321 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 EEF2KO00418 725 aaKnown RBP16.55■□□□□ 0.24
COL17A1-202ENST00000369733 FDX1P10109 184 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 S100A5P33763 92 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 PKN2Q16513 984 aaKnown RBP16.55■□□□□ 0.24
COL17A1-202ENST00000369733 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 THEM5Q8N1Q8 247 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 RFWD2Q8NHY2 731 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 WNK4Q96J92 1243 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 SPATA33Q96N06 139 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
COL17A1-202ENST00000369733 SAR1AQ9NR31 198 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 SNX9Q9Y5X1 595 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 CCDC159P0C7I6 412 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 CKAP2Q8WWK9 683 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF75CPQ92670 426 aaPredicted RBP16.55■□□□□ 0.24
COL17A1-202ENST00000369733 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 CTNNAL1Q9UBT7 734 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 SLC13A4Q9UKG4 626 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 PCDHA3Q9Y5H8 950 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 SNX13Q9Y5W8 968 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 AASDHQ4L235 1098 aaPredicted RBP16.55■□□□□ 0.24
COL17A1-202ENST00000369733 PDPK2PQ6A1A2 396 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 SMIM5Q71RC9 77 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 GDPD5Q8WTR4 605 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 ATP11BQ9Y2G3 1177 aa16.55■□□□□ 0.24
COL17A1-202ENST00000369733 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 TPST1O60507 370 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 CASP7P55210 303 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 DDR1Q08345 913 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 C6orf10Q5SRN2 563 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 SCN4BQ8IWT1 228 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 VPS50Q96JG6 964 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 TNIP3Q96KP6 325 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 TRAPPC9Q96Q05 1148 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF212Q9UDV6 495 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 C21orf2O43822 256 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 SERPINB1P30740 379 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 TMEM119Q4V9L6 283 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 POP1Q99575 1024 aaKnown RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 REXO2Q9Y3B8 237 aaKnown RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 KRT75O95678 551 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ALBP02768 609 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 TBL3Q12788 808 aaKnown RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 BAATQ14032 418 aaPredicted RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 DEFB107AQ8IZN7 70 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 C10orf88Q9H8K7 445 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 V9GYQ6 96 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 DNALI1O14645 258 aaPredicted RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 TLR2O60603 784 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 APOA4P06727 396 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ASAP3Q8TDY4 903 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF560Q96MR9 790 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ZNF184Q99676 751 aaPredicted RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 BLOC1S4Q9NUP1 217 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ETAA1Q9NY74 926 aa16.54■□□□□ 0.24
COL17A1-202ENST00000369733 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
COL17A1-202ENST00000369733 KCNQ2O43526 872 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 PSMC6P62333 389 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TMEM132DQ14C87 1099 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TWF2Q6IBS0 349 aaKnown RBP16.53■□□□□ 0.24
COL17A1-202ENST00000369733 TMCO5AQ8N6Q1 288 aa16.53■□□□□ 0.24
COL17A1-202ENST00000369733 PIK3R5Q8WYR1 880 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms