RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 RPS6KA5O75582 802 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 APOA4P06727 396 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 VCAM1P19320 739 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 INPP5AQ14642 412 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 CHI3L2Q15782 390 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 SEMA4AQ9H3S1 761 aa17.8■□□□□ 0.44
TRAPPC11-201ENST00000334690 VIL1P09327 827 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 PRKCIP41743 596 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 USP33Q8TEY7 942 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 AENQ8WTP8 325 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 DACT3Q96B18 629 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 FAM111AQ96PZ2 611 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 NOD2Q9HC29 1040 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 OLA1Q9NTK5 396 aaKnown RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 TMEM62Q0P6H9 643 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZBTB17Q13105 803 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 TAF1CQ15572 869 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 SPOCD1Q6ZMY3 1216 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 EP400NLQ6ZTU2 488 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 KCNK18Q7Z418 384 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 KDELC2Q7Z4H8 507 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 LINC00523Q86TU6 105 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 FBXO36Q8NEA4 188 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 TLR2O60603 784 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 ERVK-9P63128 1117 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 CACNB2Q08289 660 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 TMED1Q13445 227 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 TTC23LQ6PF05 361 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 NLRP9Q7RTR0 991 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 NT5DC3Q86UY8 548 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZNF526Q8TF50 670 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 KIAA1683Q9H0B3 1180 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZBBXA8MT70 800 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 MCOLN2Q8IZK6 566 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 HDAC7Q8WUI4 952 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 SHOC2Q9UQ13 582 aa17.79■□□□□ 0.44
TRAPPC11-201ENST00000334690 MYOM1P52179 1685 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 NPTXRO95502 500 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 EPHB2P29323 1055 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 HOXA10P31260 410 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 HADHAP40939 763 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 PDAP1Q13442 181 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 ELMOD1Q8N336 334 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 ACTL9Q8TC94 416 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 INTS13Q9NVM9 706 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 ARHGAP23Q9P227 1491 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZSCAN5CA6NGD5 496 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 KCNT1Q5JUK3 1230 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 TMC3Q7Z5M5 1100 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 DDX4Q9NQI0 724 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 RPS6KL1Q9Y6S9 549 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZNF197O14709 1029 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 KIF1CO43896 1103 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 GLRA3O75311 464 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 SASH3O75995 380 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 CYP3A4P08684 503 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 MRPS35P82673 323 aaKnown RBP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 TRIP10Q15642 601 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 ELMO2Q96JJ3 720 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRAPPC11-201ENST00000334690 CCDC78A2IDD5 438 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 MAP2K7O14733 419 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 KLRC4O43908 158 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 TGFB3P10600 412 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 NCAM1P13591 858 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 ERFP50548 548 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 PRPF39Q86UA1 669 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 DCP1BQ8IZD4 617 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 TEX9Q8N6V9 391 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 AVENQ9NQS1 362 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 NDUFS3O75489 264 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 ANXA9O76027 345 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 MYO1DO94832 1006 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 CTSHP09668 335 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 SCTRP47872 440 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 CLCN3P51790 818 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 SLC12A3P55017 1021 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 MYL6P60660 151 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 PTPN11Q06124 597 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 GLB1LQ6UWU2 654 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZNF662Q6ZS27 426 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 KDM4CQ9H3R0 1056 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 ZNF212Q9UDV6 495 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 EIF4E1BA6NMX2 242 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 PTK6Q13882 451 aa17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 LBRQ14739 615 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 MAPRE1Q15691 268 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 C15orf52Q6ZUT6 534 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 EIF2AQ9BY44 585 aaKnown RBP17.77■□□□□ 0.44
TRAPPC11-201ENST00000334690 GAKO14976 1311 aa17.77■□□□□ 0.43
TRAPPC11-201ENST00000334690 AIM2O14862 343 aa17.77■□□□□ 0.43
TRAPPC11-201ENST00000334690 F9P00740 461 aa17.77■□□□□ 0.43
TRAPPC11-201ENST00000334690 ATICP31939 592 aa17.77■□□□□ 0.43
TRAPPC11-201ENST00000334690 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.43
TRAPPC11-201ENST00000334690 FAXCQ5TGI0 409 aa17.77■□□□□ 0.43
TRAPPC11-201ENST00000334690 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms