RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 RPTORQ8N122 1335 aa10.8□□□□□ -0.68
SF3B2-201ENST00000322535 CCDC162PA2VCL2 907 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 TLR2O60603 784 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 CBFA2T3O75081 653 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ZBTB11O95625 1053 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 PTPN4P29074 926 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 APLP1P51693 650 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ASIC1P78348 528 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.681e-7■■■□□ 14.6
SF3B2-201ENST00000322535 STK11Q15831 433 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 FKBP1CQ5VVH2 108 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 SLC25A41Q8N5S1 370 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 GMCL1P1Q8NEA9 526 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ACTRT1Q8TDG2 376 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 BAP1Q92560 729 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 FAM20AQ96MK3 541 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 AMNQ9BXJ7 453 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 EHD1Q9H4M9 534 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ZFYVE28Q9HCC9 887 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 PHTF1Q9UMS5 762 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 EXOC7Q9UPT5 735 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 GOLGA8IPA6NC78 632 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 CCDC188H7C350 402 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 TRAF5O00463 557 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 MEIS2O14770 477 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ZNF862O60290 1169 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 GUCY1B2O75343 617 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 SEC24DO94855 1032 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 HNRNPH3P31942 346 aaKnown RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ASTE1Q2TB18 679 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 TWF2Q6IBS0 349 aaKnown RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 PHLDB2Q86SQ0 1253 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.79□□□□□ -0.688e-11■□□□□ 9.2
SF3B2-201ENST00000322535 GMCL1Q96IK5 515 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ECSITQ9BQ95 431 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 NUDT12Q9BQG2 462 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 SLITRK6Q9H5Y7 841 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 EMILIN3Q9NT22 766 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 TRNAU1APQ9NX07 287 aaKnown RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 ARMCX3Q9UH62 379 aaPredicted RBP10.79□□□□□ -0.68
SF3B2-201ENST00000322535 COQ6Q9Y2Z9 468 aa10.79□□□□□ -0.68
SF3B2-201ENST00000322535 SH3PXD2BA1X283 911 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 STAMBPO95630 424 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ALAS1P13196 640 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 TAC1P20366 129 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 STAT3P40763 770 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 PRR16Q569H4 304 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 PCNX4Q63HM2 1172 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 MAP1SQ66K74 1059 aaPredicted RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 RASSF3Q86WH2 238 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 SULF1Q8IWU6 871 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 CFAP61Q8NHU2 1237 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 DCPSQ96C86 337 aaKnown RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 MRRFQ96E11 262 aaKnown RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 FAM161BQ96MY7 647 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ERVK-5Q9HDB9 667 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 TIMMDC1Q9NPL8 285 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ZDHHC18Q9NUE0 388 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 SNX9Q9Y5X1 595 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 NFIBO00712 420 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 RIPK2O43353 540 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 SORBS3O60504 671 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 CCNE1P24864 410 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ANXA13P27216 316 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ACADVLP49748 655 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 SPIDRQ14159 915 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 KLHDC10Q6PID8 442 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 USP43Q70EL4 1123 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 OR7G1Q8NGA0 311 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 DGCR14Q96DF8 476 aaKnown RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 TXLNGYQ9BZA5 131 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 NPHS2Q9NP85 383 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 RIC8AQ9NPQ8 531 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 CCDC177Q9NQR7 707 aaPredicted RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 NUMBLQ9Y6R0 609 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 SGTAO43765 313 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 DCTN3O75935 186 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 FUCA1P04066 466 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 PTPRAP18433 802 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 WEE1P30291 646 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ZNF423Q2M1K9 1284 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 BOLA3Q53S33 107 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 FIGNQ5HY92 759 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 SPOPLQ6IQ16 392 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 AADACL2Q6P093 401 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 NLRP9Q7RTR0 991 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 KRT25Q7Z3Z0 450 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 CLVS1Q8IUQ0 354 aaPredicted RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 EXD1Q8NHP7 514 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 C18orf8Q96DM3 657 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 PSKH2Q96QS6 385 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 LSM14BQ9BX40 385 aaKnown RBP10.78□□□□□ -0.68
SF3B2-201ENST00000322535 GRIP2Q9C0E4 1043 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 ELP3Q9H9T3 547 aa10.78□□□□□ -0.68
SF3B2-201ENST00000322535 STX18Q9P2W9 335 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms