RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ALADP13716 330 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ATPAF2Q8N5M1 289 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 PAFAH2Q99487 392 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 UBE2OQ9C0C9 1292 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RGS5O15539 181 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 DGAT1O75907 488 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 IMPDH2P12268 514 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 MAPK1P28482 360 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RXRGP48443 463 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 C12orf60Q5U649 245 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 DAGLBQ8NCG7 672 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 MYMKA6NI61 221 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 S100A1P23297 94 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 C1DQ13901 141 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 ZNF235Q14590 738 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CCNG2Q16589 344 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 TIMM50Q3ZCQ8 353 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 NAPEPLDQ6IQ20 393 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ZNF513Q8N8E2 541 aaPredicted RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 EXD1Q8NHP7 514 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 MCEEQ96PE7 176 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 COA1Q9GZY4 146 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 AP1G2O75843 785 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 NCOA4Q13772 614 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ITGA9Q13797 1035 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 BCORL1Q5H9F3 1711 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 EPHA10Q5JZY3 1008 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CDC42EP4Q9H3Q1 356 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 GMEB1Q9Y692 573 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FCHO1O14526 889 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 NBNO60934 754 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SOAT2O75908 522 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 COG2Q14746 738 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 PTPAQ15257 358 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 GDF11O95390 407 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RAG1P15918 1043 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 UNC45BQ8IWX7 931 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SHCBP1Q8NEM2 672 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FLCNQ8NFG4 579 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ZNF507Q8TCN5 953 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ELMO2Q96JJ3 720 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SELENONQ9NZV5 590 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 JAK1P23458 1154 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 GUCY1A2P33402 732 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RFC5P40937 340 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ACADSBP45954 432 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SARSP49591 514 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 OSTNP61366 133 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RABL6Q3YEC7 729 aaPredicted RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 TAS2R42Q7RTR8 314 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 LENG1Q96BZ8 264 aaPredicted RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 PLA2G12BQ9BX93 195 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SEC31BQ9NQW1 1179 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 TULP2O00295 520 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FASP25445 335 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RGS4P49798 205 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 MROH9Q5TGP6 573 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 RNF43Q68DV7 783 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 TTC23LQ6PF05 361 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ATXN7L3BQ96GX2 97 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 SARS2Q9NP81 518 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 KLHL20Q9Y2M5 609 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ZNF609O15014 1411 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ZNF862O60290 1169 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ZC3H11AO75152 810 aaKnown RBP eCLIP8.53□□□□□ -1.04
APOB-201ENST00000233242 UNC5CO95185 931 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ARIH2O95376 493 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 AKR1B1P15121 316 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CATSPER4Q7RTX7 472 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FEZF2Q8TBJ5 459 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 AP3M1Q9Y2T2 418 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CAPN6Q9Y6Q1 641 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 PIK3CDO00329 1044 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 MYL4P12829 197 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FAM98BQ52LJ0 330 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 CCDC81Q6ZN84 652 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ARHGEF19Q8IW93 802 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 DEFB107AQ8IZN7 70 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 NCKIPSDQ9NZQ3 722 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CST8O60676 142 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FDPSP14324 419 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 KCNJ1P48048 391 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 PTDSS1P48651 473 aaKnown RBP8.53□□□□□ -1.04
APOB-201ENST00000233242 DMPKQ09013 629 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 CCDC153Q494R4 210 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ARHGAP17Q68EM7 881 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FAM71DQ8N9W8 422 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 FNIP1Q8TF40 1166 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ATP8B4Q8TF62 1192 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 ABHD8Q96I13 439 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 NLRP4Q96MN2 994 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 AP5M1Q9H0R1 490 aa8.53□□□□□ -1.04
APOB-201ENST00000233242 TDP2O95551 362 aa8.52□□□□□ -1.04
APOB-201ENST00000233242 SERPINE1P05121 402 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms