RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Nell1Q2VWQ2 810 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Nol8Q3UHX0 1147 aaKnown RBP12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Pwwp2aQ69Z61 730 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Casd1Q7TN73 797 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Hspbap1Q8BK58 483 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 MdficQ8BX65 247 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 4933409G03RikQ8C5U0 320 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Pnma3Q8JZW8 466 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Nup133Q8R0G9 1155 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Tada3Q8R0L9 432 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Oxnad1Q8VE38 311 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Pde2aQ922S4 916 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Bbox1Q924Y0 387 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 PinlypQ9CQD7 212 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Q9CYI0 393 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Tbc1d7Q9D0K0 293 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Lonrf3Q9D4H7 753 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Plxnd1Q3UH93 1925 aa12.28□□□□□ -0.44
Hmgb1-202ENSMUST00000093196 Prdm12A2AJ77 365 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ptchd4B9EKX1 904 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cyp2w1E9Q816 493 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Gm6583E9Q8Z1 469 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 TrdnE9Q9K5 693 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Gucy1a2F8VQK3 730 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CatspereP0DP43 985 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Hspd1P63038 573 aaKnown RBP12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 GaltQ03249 379 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Trappc10Q3TLI0 1259 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Mex3dQ3UE17 643 aaKnown RBP12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Sez6l2Q4V9Z5 910 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Arnt2Q61324 712 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ccdc189Q6NZQ0 333 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cd300aQ6SJQ0 318 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Enox1Q8BHR2 643 aaKnown RBP12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 LsampQ8BLK3 341 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 LRWD1Q8BUI3 648 aaKnown RBP12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Amz1Q8BVF9 502 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Txndc11Q8K2W3 948 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ces4aQ8R0W5 563 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Hdac8Q8VH37 377 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 PlvapQ91VC4 438 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ssu72Q9CY97 194 aaKnown RBP12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Gcc1Q9D4H2 778 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Smco2Q9DA21 347 aa12.27□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 BC034090A0A087WP46 1202 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Vmn2r55G3UWZ4 781 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Vmn2r53L7N473 806 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CrcpO35427 148 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Pik3r1P26450 724 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cwc27Q3TKY6 469 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tdrd5Q5VCS6 1040 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Il17raQ60943 864 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cyfip1Q7TMB8 1253 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cyth4Q80YW0 393 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Armc6Q8BNU0 468 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tcp11l1Q8BTG3 509 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Frs2Q8C180 508 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Q8C4P0 716 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tbc1d14Q8CGA2 694 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ces1dQ8VCT4 565 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Gripap1Q8VD04 806 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Drc3Q9D5E4 523 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Cmtm5Q9D6G9 156 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Map3k6Q9WTR2 1291 aa12.26□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dopey1Q8BL99 2399 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ankhd1E9PUR0 2548 aaKnown RBP12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CicQ924A2 2510 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Igkv17-121A0A0G2JFA8 117 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Krtap4-2B1AQ85 167 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dnaaf5B9EJR8 853 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Akap1O08715 857 aaKnown RBP12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Capn6O35646 641 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Pde9aO70628 534 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 IppP28575 584 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dhrs11Q3U0B3 260 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Naf1Q3UMQ8 489 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Q3V0E1 1183 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Mfhas1Q3V1N1 1048 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ddr2Q62371 854 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Nutm1Q8BHP2 1126 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tmem220Q8BP07 167 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CptpQ8BS40 216 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Leng8Q8CBY3 785 aaKnown RBP12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Polr3glQ8R0C0 218 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Olfr397Q8VEZ6 315 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Tti1Q91V83 1085 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Atp6v0a4Q920R6 833 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Speer4f1Q9D5Q6 258 aa12.25□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ms4a12A0A087WSB9 263 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Dhx15O35286 795 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 TnxbO35452 4006 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Aldh1a7O35945 501 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 RngttO55236 597 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Ttc3O88196 1979 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 FosP01101 380 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 RelP15307 587 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 CpoxP36552 443 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Btg3P50615 252 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 MplQ08351 625 aa12.24□□□□□ -0.45
Hmgb1-202ENSMUST00000093196 Klrb1Q0ZUP1 214 aa12.24□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 83.3 ms