RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W CYC2P38909 366 aa2.29□□□□□ -2.04
YML040WYML040W UBR2Q07963 1872 aa2.29□□□□□ -2.04
YML040WYML040W GPI2P46961 280 aa2.28□□□□□ -2.04
YML040WYML040W FMN1Q03778 218 aa2.28□□□□□ -2.04
YML040WYML040W CSN9Q03981 162 aa2.28□□□□□ -2.04
YML040WYML040W RRT7Q07829 113 aa2.28□□□□□ -2.04
YML040WYML040W CMC4Q3E7A9 73 aa2.28□□□□□ -2.04
YML040WYML040W SPA2P23201 1466 aaKnown RBP2.28□□□□□ -2.04
YML040WYML040W RPC19P28000 142 aaKnown RBP2.27□□□□□ -2.05
YML040WYML040W RCF2P53721 224 aa2.27□□□□□ -2.05
YML040WYML040W NMA1Q06178 401 aaKnown RBP2.27□□□□□ -2.05
YML040WYML040W YGL230CP53074 147 aa2.26□□□□□ -2.05
YML040WYML040W YGR039WP53225 103 aa2.26□□□□□ -2.05
YML040WYML040W MRPL15P36523 253 aa2.25□□□□□ -2.05
YML040WYML040W TRS20P38334 175 aa2.25□□□□□ -2.05
YML040WYML040W SPC2Q04969 178 aa2.25□□□□□ -2.05
YML040WYML040W YPR203WQ08994 102 aa2.25□□□□□ -2.05
YML040WYML040W YHR212W-AP0CX91 67 aa2.24□□□□□ -2.05
YML040WYML040W SUI1P32911 108 aaKnown RBP2.23□□□□□ -2.05
YML040WYML040W PHB1P40961 287 aa2.23□□□□□ -2.05
YML040WYML040W YGR042WP53227 271 aa2.23□□□□□ -2.05
YML040WYML040W HHO1P53551 258 aa2.23□□□□□ -2.05
YML040WYML040W KEI1Q06346 221 aa2.23□□□□□ -2.05
YML040WYML040W YHR140WP38842 239 aa2.22□□□□□ -2.05
YML040WYML040W YGL204CP53089 101 aa2.22□□□□□ -2.05
YML040WYML040W ATP19P81451 68 aa2.22□□□□□ -2.05
YML040WYML040W YCL001W-AP87012 153 aa2.22□□□□□ -2.05
YML040WYML040W TAF2P23255 1407 aa2.22□□□□□ -2.05
YML040WYML040W VAR1P02381 398 aa2.21□□□□□ -2.06
YML040WYML040W HSP150P32478 413 aa2.21□□□□□ -2.06
YML040WYML040W YEL014CP39999 101 aa2.21□□□□□ -2.06
YML040WYML040W SPC3Q12133 184 aa2.21□□□□□ -2.06
YML040WYML040W ACC1Q00955 2233 aaKnown RBP2.21□□□□□ -2.06
YML040WYML040W COX5BP00425 151 aa2.2□□□□□ -2.06
YML040WYML040W GIM4P40005 111 aaKnown RBP2.2□□□□□ -2.06
YML040WYML040W YLR361C-AQ3E795 98 aa2.2□□□□□ -2.06
YML040WYML040W RPL14AP36105 138 aaKnown RBP2.19□□□□□ -2.06
YML040WYML040W POP7P38291 140 aa2.19□□□□□ -2.06
YML040WYML040W RPL14BP38754 138 aaKnown RBP2.19□□□□□ -2.06
YML040WYML040W IPT1P38954 527 aa2.19□□□□□ -2.06
YML040WYML040W VMA10P48836 114 aaKnown RBP2.19□□□□□ -2.06
YML040WYML040W FIT1Q04433 528 aa2.19□□□□□ -2.06
YML040WYML040W KIN28P06242 306 aa2.18□□□□□ -2.06
YML040WYML040W YGL041W-AP0C5N3 154 aa2.18□□□□□ -2.06
YML040WYML040W UBR1P19812 1950 aa2.18□□□□□ -2.06
YML040WYML040W YKR070WP36151 352 aaKnown RBP2.17□□□□□ -2.06
YML040WYML040W HPM1P40481 377 aa2.17□□□□□ -2.06
YML040WYML040W APS3P47064 194 aa2.17□□□□□ -2.06
YML040WYML040W YNL019CP53975 284 aa2.17□□□□□ -2.06
YML040WYML040W TIM8P57744 87 aa2.17□□□□□ -2.06
YML040WYML040W RPS1BP23248 255 aaKnown RBP2.17□□□□□ -2.06
YML040WYML040W FYV5P25585 152 aa2.17□□□□□ -2.06
YML040WYML040W SUA7P29055 345 aaPredicted RBP2.17□□□□□ -2.06
YML040WYML040W YHL037CP38733 133 aa2.17□□□□□ -2.06
YML040WYML040W YPR153WQ06537 140 aa2.17□□□□□ -2.06
YML040WYML040W HYM1P32464 399 aa2.16□□□□□ -2.06
YML040WYML040W PRS3P38689 320 aaKnown RBP2.16□□□□□ -2.06
YML040WYML040W LSM8P47093 109 aaKnown RBP2.16□□□□□ -2.06
YML040WYML040W DIE2P50076 525 aa2.16□□□□□ -2.06
YML040WYML040W SOM1Q05676 74 aa2.16□□□□□ -2.06
YML040WYML040W GPI11Q06636 219 aa2.16□□□□□ -2.06
YML040WYML040W YOR385WQ08909 290 aa2.16□□□□□ -2.06
YML040WYML040W ATP14Q12349 124 aa2.16□□□□□ -2.06
YML040WYML040W PRE1P22141 198 aaKnown RBP2.15□□□□□ -2.07
YML040WYML040W ATG8P38182 117 aaRIP-Chip data2.15□□□□□ -2.07not detected
YML040WYML040W TVP18Q04767 167 aa2.15□□□□□ -2.07
YML040WYML040W FMP49A0A023PZB3 126 aa2.14□□□□□ -2.07
YML040WYML040W YCR050CP25630 102 aa2.14□□□□□ -2.07
YML040WYML040W RPS1AP33442 255 aaKnown RBP2.14□□□□□ -2.07
YML040WYML040W YBR027CP38220 110 aa2.14□□□□□ -2.07
YML040WYML040W SPG1P50088 95 aa2.14□□□□□ -2.07
YML040WYML040W ECM31P38122 312 aa2.13□□□□□ -2.07
YML040WYML040W RPS20P38701 121 aaKnown RBP2.13□□□□□ -2.07
YML040WYML040W YFL051CP43552 160 aa2.13□□□□□ -2.07
YML040WYML040W EMC4P53073 190 aa2.13□□□□□ -2.07
YML040WYML040W DYN2Q02647 92 aa2.13□□□□□ -2.07
YML040WYML040W ELC1Q03071 99 aa2.13□□□□□ -2.07
YML040WYML040W CNL1Q06333 122 aa2.13□□□□□ -2.07
YML040WYML040W HUT1Q12520 339 aa2.13□□□□□ -2.07
YML040WYML040W NHP6AP11632 93 aaKnown RBP2.12□□□□□ -2.07
YML040WYML040W YAL064WP39711 94 aa2.12□□□□□ -2.07
YML040WYML040W YGR017WP53210 297 aa2.12□□□□□ -2.07
YML040WYML040W MHF1Q3E835 90 aa2.12□□□□□ -2.07
YML040WYML040W RIF1P29539 1916 aa2.11□□□□□ -2.07
YML040WYML040W DCV1P43595 202 aa2.11□□□□□ -2.07
YML040WYML040W YDR278CQ05612 105 aa2.11□□□□□ -2.07
YML040WYML040W FCY1Q12178 158 aa2.11□□□□□ -2.07
YML040WYML040W DDP1Q99321 188 aaKnown RBP2.11□□□□□ -2.07
YML040WYML040W YNL277W-AQ3E7Z0 62 aa2.1□□□□□ -2.07
YML040WYML040W TMA23Q03525 211 aa2.09□□□□□ -2.08
YML040WYML040W RAD50P12753 1312 aa2.08□□□□□ -2.08
YML040WYML040W HYP2P23301 157 aaKnown RBP2.08□□□□□ -2.08
YML040WYML040W QCR10P37299 77 aa2.08□□□□□ -2.08
YML040WYML040W SEN15Q04675 128 aa2.08□□□□□ -2.08
YML040WYML040W RAF1Q06891 181 aa2.08□□□□□ -2.08
YML040WYML040W VAM10Q08474 114 aa2.08□□□□□ -2.08
YML040WYML040W FUN14P18411 198 aa2.06□□□□□ -2.08
YML040WYML040W PHS1P40857 217 aa2.06□□□□□ -2.08
YML040WYML040W SFT1P43682 97 aa2.06□□□□□ -2.08
YML040WYML040W YGL149WP53116 101 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms