RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W ATG8P38182 117 aaRIP-Chip data1.48□□□□□ -2.17not detected
VPS38YLR360W SNU13P39990 126 aaKnown RBP1.48□□□□□ -2.17
VPS38YLR360W POG1P40473 351 aa1.48□□□□□ -2.17
VPS38YLR360W MCM22P47167 239 aa1.48□□□□□ -2.17
VPS38YLR360W YNL140CP53910 189 aa1.48□□□□□ -2.17
VPS38YLR360W TIM8P57744 87 aa1.48□□□□□ -2.17
VPS38YLR360W BUD25P85052 153 aa1.48□□□□□ -2.17
VPS38YLR360W YDR366CP87287 132 aa1.48□□□□□ -2.17
VPS38YLR360W VPS28Q02767 242 aa1.48□□□□□ -2.17
VPS38YLR360W GRX5Q02784 150 aa1.48□□□□□ -2.17
VPS38YLR360W CUE4Q04201 117 aaPredicted RBP1.48□□□□□ -2.17
VPS38YLR360W YCR075W-AQ3E830 75 aa1.48□□□□□ -2.17
VPS38YLR360W YIL134C-AQ45U18 67 aa1.48□□□□□ -2.17
VPS38YLR360W YER039C-AP0CD97 72 aa1.47□□□□□ -2.17
VPS38YLR360W TIR1P10863 254 aa1.47□□□□□ -2.17
VPS38YLR360W YCR023CP25351 611 aa1.47□□□□□ -2.17
VPS38YLR360W PEX34P25584 144 aa1.47□□□□□ -2.17
VPS38YLR360W SEC17P32602 292 aa1.47□□□□□ -2.17
VPS38YLR360W EMP24P32803 203 aaKnown RBP1.47□□□□□ -2.17
VPS38YLR360W SHE2P36068 246 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
VPS38YLR360W FLO9P39712 1322 aa1.47□□□□□ -2.17
VPS38YLR360W AVT2P39981 480 aa1.47□□□□□ -2.17
VPS38YLR360W YER076CP40049 302 aa1.47□□□□□ -2.17
VPS38YLR360W YNL194CP40169 301 aa1.47□□□□□ -2.17
VPS38YLR360W MOB1P40484 314 aa1.47□□□□□ -2.17
VPS38YLR360W FMC1P40491 155 aa1.47□□□□□ -2.17
VPS38YLR360W VMA21P41806 77 aa1.47□□□□□ -2.17
VPS38YLR360W GLC8P41818 229 aa1.47□□□□□ -2.17
VPS38YLR360W ERJ5P43613 295 aaPredicted RBP1.47□□□□□ -2.17
VPS38YLR360W AIF1P52923 378 aa1.47□□□□□ -2.17
VPS38YLR360W YGL101WP53144 215 aa1.47□□□□□ -2.17
VPS38YLR360W YLR460CP54007 376 aa1.47□□□□□ -2.17
VPS38YLR360W ELC1Q03071 99 aa1.47□□□□□ -2.17
VPS38YLR360W MAK3Q03503 176 aa1.47□□□□□ -2.17
VPS38YLR360W YMR315WQ04869 349 aaKnown RBP1.47□□□□□ -2.17
VPS38YLR360W PRP11Q07350 266 aaPredicted RBP1.47□□□□□ -2.17
VPS38YLR360W ATG10Q07879 167 aa1.47□□□□□ -2.17
VPS38YLR360W YDL085C-AQ3E7B7 68 aaKnown RBP1.47□□□□□ -2.17
VPS38YLR360W YNR034W-AQ3E841 98 aa1.47□□□□□ -2.17
VPS38YLR360W THP2O13539 261 aaKnown RBP1.46□□□□□ -2.18
VPS38YLR360W VAR1P02381 398 aa1.46□□□□□ -2.18
VPS38YLR360W ADK1P07170 222 aaKnown RBP1.46□□□□□ -2.18
VPS38YLR360W YBR121C-AP0C5L4 52 aa1.46□□□□□ -2.18
VPS38YLR360W PPA2P28239 310 aa1.46□□□□□ -2.18
VPS38YLR360W PRP18P33411 251 aaPredicted RBP1.46□□□□□ -2.18
VPS38YLR360W LDB7P38210 180 aa1.46□□□□□ -2.18
VPS38YLR360W MIC12P38341 106 aa1.46□□□□□ -2.18
VPS38YLR360W DOG2P38773 246 aa1.46□□□□□ -2.18
VPS38YLR360W IPT1P38954 527 aa1.46□□□□□ -2.18
VPS38YLR360W YEA6P39953 335 aa1.46□□□□□ -2.18
VPS38YLR360W COX15P40086 486 aa1.46□□□□□ -2.18
VPS38YLR360W RPL33BP41056 107 aaKnown RBP1.46□□□□□ -2.18
VPS38YLR360W MGA1P53050 456 aa1.46□□□□□ -2.18
VPS38YLR360W TOS8P53147 276 aa1.46□□□□□ -2.18
VPS38YLR360W ERV29P53337 310 aa1.46□□□□□ -2.18
VPS38YLR360W UBC7Q02159 165 aa1.46□□□□□ -2.18
VPS38YLR360W AIM34Q03673 198 aa1.46□□□□□ -2.18
VPS38YLR360W PKR1Q03880 122 aaKnown RBP1.46□□□□□ -2.18
VPS38YLR360W SDH7Q04401 133 aa1.46□□□□□ -2.18
VPS38YLR360W GPI11Q06636 219 aa1.46□□□□□ -2.18
VPS38YLR360W YOL131WQ08270 108 aa1.46□□□□□ -2.18
VPS38YLR360W FCF2Q12035 217 aaPredicted RBP1.46□□□□□ -2.18
VPS38YLR360W PST2Q12335 198 aaKnown RBP1.46□□□□□ -2.18
VPS38YLR360W YKL183C-AQ3E765 70 aa1.46□□□□□ -2.18
VPS38YLR360W YDR157WA0A023PZE8 133 aa1.45□□□□□ -2.18
VPS38YLR360W YHR139C-AO13536 103 aa1.45□□□□□ -2.18
VPS38YLR360W RPS28BP0C0X0 67 aaKnown RBP1.45□□□□□ -2.18
VPS38YLR360W HAP3P13434 144 aa1.45□□□□□ -2.18
VPS38YLR360W GCY1P14065 312 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
VPS38YLR360W TMA19P35691 167 aaKnown RBP1.45□□□□□ -2.18
VPS38YLR360W SFK1P35735 353 aa1.45□□□□□ -2.18
VPS38YLR360W HPA3P39979 161 aa1.45□□□□□ -2.18
VPS38YLR360W YJL218WP40892 196 aaKnown RBP1.45□□□□□ -2.18
VPS38YLR360W YJR015WP47090 510 aa1.45□□□□□ -2.18
VPS38YLR360W ALG13P53178 202 aa1.45□□□□□ -2.18
VPS38YLR360W YNL033WP53964 284 aa1.45□□□□□ -2.18
VPS38YLR360W YNL019CP53975 284 aa1.45□□□□□ -2.18
VPS38YLR360W RPL22BP56628 122 aaKnown RBP1.45□□□□□ -2.18
VPS38YLR360W ABF2Q02486 183 aa1.45□□□□□ -2.18
VPS38YLR360W TMA23Q03525 211 aa1.45□□□□□ -2.18
VPS38YLR360W CNL1Q06333 122 aa1.45□□□□□ -2.18
VPS38YLR360W NOC4Q06512 552 aaPredicted RBP1.45□□□□□ -2.18
VPS38YLR360W YET3Q07451 203 aa1.45□□□□□ -2.18
VPS38YLR360W RPL13AQ12690 199 aaPredicted RBP1.45□□□□□ -2.18
VPS38YLR360W YLR099W-AQ3E798 87 aa1.45□□□□□ -2.18
VPS38YLR360W RPS28AQ3E7X9 67 aaPredicted RBP1.45□□□□□ -2.18
VPS38YLR360W YOS1Q3E834 85 aa1.45□□□□□ -2.18
VPS38YLR360W COA6Q3E846 104 aa1.45□□□□□ -2.18
VPS38YLR360W MBF1O14467 151 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W RPS25BP0C0T4 108 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W STE18P18852 110 aa1.44□□□□□ -2.18
VPS38YLR360W YGL010WP25338 174 aa1.44□□□□□ -2.18
VPS38YLR360W RFA3P26755 122 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W MRP17P28778 131 aa1.44□□□□□ -2.18
VPS38YLR360W NTF2P33331 125 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W MRPL24P36525 258 aaPredicted RBP1.44□□□□□ -2.18
VPS38YLR360W LSM2P38203 95 aaKnown RBP1.44□□□□□ -2.18
VPS38YLR360W SLM6P38343 150 aa1.44□□□□□ -2.18
VPS38YLR360W CUE1P38428 203 aa1.44□□□□□ -2.18
VPS38YLR360W YHR130CP38834 111 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms