RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RAV2Q03956 351 aa9□□□□□ -0.97
SIM1YIL123W YOR105WQ08504 108 aa9□□□□□ -0.97
SIM1YIL123W ATX2Q12067 313 aa9□□□□□ -0.97
SIM1YIL123W COX2P00410 251 aa8.99□□□□□ -0.97
SIM1YIL123W MRS1P07266 363 aa8.99□□□□□ -0.97
SIM1YIL123W YPL108WQ02872 168 aaPredicted RBP8.99□□□□□ -0.97
SIM1YIL123W YMR166CQ03829 368 aa8.99□□□□□ -0.97
SIM1YIL123W PBP4Q07362 185 aaKnown RBP8.99□□□□□ -0.97
SIM1YIL123W MED7Q08278 222 aa8.99□□□□□ -0.97
SIM1YIL123W YPR063CQ12160 140 aa8.99□□□□□ -0.97
SIM1YIL123W YLR302CO13544 120 aa8.98□□□□□ -0.97
SIM1YIL123W TY1A-HP0C2I4 478 aaKnown RBP8.98□□□□□ -0.97
SIM1YIL123W YPS1P32329 569 aa8.98□□□□□ -0.97
SIM1YIL123W QRI5P32344 111 aa8.98□□□□□ -0.97
SIM1YIL123W SSS1P35179 80 aa8.98□□□□□ -0.97
SIM1YIL123W DAD2P36162 133 aa8.98□□□□□ -0.97
SIM1YIL123W WWM1P43582 211 aaKnown RBP8.98□□□□□ -0.97
SIM1YIL123W IMP2P46972 177 aa8.98□□□□□ -0.97
SIM1YIL123W SWT21P53873 357 aaPredicted RBP8.98□□□□□ -0.97
SIM1YIL123W IRC23Q08416 157 aa8.98□□□□□ -0.97
SIM1YIL123W URA2P07259 2214 aaKnown RBP8.98□□□□□ -0.97
SIM1YIL123W TIR1P10863 254 aa8.97□□□□□ -0.97
SIM1YIL123W YBR090CP38253 122 aa8.97□□□□□ -0.97
SIM1YIL123W TOM7P53507 60 aa8.97□□□□□ -0.97
SIM1YIL123W CYT2Q00873 224 aa8.97□□□□□ -0.97
SIM1YIL123W YNR034W-AQ3E841 98 aa8.97□□□□□ -0.97
SIM1YIL123W YJL027CP47063 138 aaPredicted RBP8.97□□□□□ -0.97
SIM1YIL123W CUE4Q04201 117 aaPredicted RBP8.97□□□□□ -0.97
SIM1YIL123W HMRA1P0CY11 126 aa8.96□□□□□ -0.98
SIM1YIL123W TIR2P33890 251 aa8.96□□□□□ -0.98
SIM1YIL123W YPT10P38146 199 aa8.96□□□□□ -0.98
SIM1YIL123W YGR149WP48236 432 aa8.96□□□□□ -0.98
SIM1YIL123W YGR219WP53307 113 aa8.96□□□□□ -0.98
SIM1YIL123W YCL001W-BQ96VH2 84 aa8.96□□□□□ -0.98
SIM1YIL123W FRS1P15624 595 aaKnown RBP8.95□□□□□ -0.98
SIM1YIL123W FEN2P25621 512 aaKnown RBP8.95□□□□□ -0.98
SIM1YIL123W GLE2P40066 365 aa8.95□□□□□ -0.98
SIM1YIL123W LSM8P47093 109 aaKnown RBP8.95□□□□□ -0.98
SIM1YIL123W TIM18Q08749 192 aa8.95□□□□□ -0.98
SIM1YIL123W POR1P04840 283 aaKnown RBP8.94□□□□□ -0.98
SIM1YIL123W CYC3P06182 269 aa8.94□□□□□ -0.98
SIM1YIL123W HUA1P40325 198 aa8.94□□□□□ -0.98
SIM1YIL123W MIX23P38162 196 aa8.93□□□□□ -0.98
SIM1YIL123W TIF11P38912 153 aaKnown RBP8.93□□□□□ -0.98
SIM1YIL123W YDL183CP48569 320 aa8.93□□□□□ -0.98
SIM1YIL123W CGR1P53188 120 aa8.93□□□□□ -0.98
SIM1YIL123W PRS4P38063 326 aaPredicted RBP8.92□□□□□ -0.98
SIM1YIL123W AME1P38313 324 aa8.92□□□□□ -0.98
SIM1YIL123W LSM4P40070 187 aaKnown RBP8.92□□□□□ -0.98
SIM1YIL123W YIL077CP40508 320 aa8.92□□□□□ -0.98
SIM1YIL123W GIM5Q04493 163 aa8.92□□□□□ -0.98
SIM1YIL123W CUP2P15315 225 aa8.91□□□□□ -0.98
SIM1YIL123W PAM17P36147 197 aa8.91□□□□□ -0.98
SIM1YIL123W AIM24P47127 394 aa8.91□□□□□ -0.98
SIM1YIL123W YML122CQ03207 126 aa8.91□□□□□ -0.98
SIM1YIL123W TMA17Q12513 150 aa8.91□□□□□ -0.98
SIM1YIL123W HTB2P02294 131 aa8.9□□□□□ -0.98
SIM1YIL123W MIC12P38341 106 aa8.9□□□□□ -0.98
SIM1YIL123W RPB11P38902 120 aa8.9□□□□□ -0.98
SIM1YIL123W SNU13P39990 126 aaKnown RBP8.9□□□□□ -0.98
SIM1YIL123W POR2P40478 281 aa8.9□□□□□ -0.98
SIM1YIL123W ERS1P17261 260 aa8.89□□□□□ -0.99
SIM1YIL123W MRPL20P22354 195 aaPredicted RBP8.89□□□□□ -0.99
SIM1YIL123W FZF1P32805 299 aa8.89□□□□□ -0.99
SIM1YIL123W MBB1P39534 108 aa8.89□□□□□ -0.99
SIM1YIL123W COX18P53239 316 aa8.89□□□□□ -0.99
SIM1YIL123W UBC7Q02159 165 aa8.89□□□□□ -0.99
SIM1YIL123W RPS22BQ3E7Y3 130 aaKnown RBP8.89□□□□□ -0.99
SIM1YIL123W RPL31BP0C2H9 113 aaKnown RBP8.88□□□□□ -0.99
SIM1YIL123W INO2P26798 304 aa8.88□□□□□ -0.99
SIM1YIL123W SEN15Q04675 128 aa8.88□□□□□ -0.99
SIM1YIL123W TRI1Q05024 226 aa8.88□□□□□ -0.99
SIM1YIL123W COA6Q3E846 104 aa8.88□□□□□ -0.99
SIM1YIL123W YFR045WP43617 309 aa8.88□□□□□ -0.99
SIM1YIL123W YCR024C-BQ3E7Z8 88 aa8.88□□□□□ -0.99
SIM1YIL123W YER145C-AA0A023PYF4 145 aa8.87□□□□□ -0.99
SIM1YIL123W MRPL31P14063 131 aaPredicted RBP8.87□□□□□ -0.99
SIM1YIL123W OST3P48439 350 aa8.87□□□□□ -0.99
SIM1YIL123W CAB4P53332 305 aa8.87□□□□□ -0.99
SIM1YIL123W DAD4P69851 72 aa8.87□□□□□ -0.99
SIM1YIL123W DAD1Q12248 94 aa8.87□□□□□ -0.99
SIM1YIL123W IZH1Q03419 316 aa8.86□□□□□ -0.99
SIM1YIL123W ATG33Q06485 197 aa8.86□□□□□ -0.99
SIM1YIL123W SRL1Q08673 210 aa8.86□□□□□ -0.99
SIM1YIL123W RPB9P27999 122 aa8.85□□□□□ -0.99
SIM1YIL123W YNL194CP40169 301 aa8.85□□□□□ -0.99
SIM1YIL123W YMR141CP40211 102 aa8.85□□□□□ -0.99
SIM1YIL123W SPG4Q04438 115 aa8.85□□□□□ -0.99
SIM1YIL123W UTP23Q12339 254 aaKnown RBP8.84□□□□□ -0.99
SIM1YIL123W YIL134C-AQ45U18 67 aa8.84□□□□□ -0.99
SIM1YIL123W RPL15AP05748 204 aaKnown RBP8.83□□□□□ -1
SIM1YIL123W YER190C-BP0CX94 160 aa8.83□□□□□ -1
SIM1YIL123W YEL077W-AP0CX95 160 aa8.83□□□□□ -1
SIM1YIL123W YGR296C-BP0CX96 160 aa8.83□□□□□ -1
SIM1YIL123W YPL283W-BP0CX97 160 aa8.83□□□□□ -1
SIM1YIL123W YPR204C-AP0CX98 160 aa8.83□□□□□ -1
SIM1YIL123W SNF11P38956 169 aa8.83□□□□□ -1
SIM1YIL123W VPS55P47111 140 aa8.83□□□□□ -1
SIM1YIL123W ERV14P53173 138 aa8.83□□□□□ -1
SIM1YIL123W NCE103P53615 221 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms