RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C AYT1Q12226 474 aa6.16□□□□□ -1.42
SNP1YIL061C SPO24Q3E752 67 aa6.16□□□□□ -1.42
SNP1YIL061C YHR213WP0CI67 198 aa6.15□□□□□ -1.42
SNP1YIL061C TIR1P10863 254 aa6.15□□□□□ -1.42
SNP1YIL061C FRS1P15624 595 aaKnown RBP6.15□□□□□ -1.42
SNP1YIL061C PHO85P17157 305 aa6.15□□□□□ -1.42
SNP1YIL061C PRE9P23638 258 aaKnown RBP6.15□□□□□ -1.42
SNP1YIL061C QRI5P32344 111 aa6.15□□□□□ -1.42
SNP1YIL061C RRT1P38192 103 aa6.15□□□□□ -1.42
SNP1YIL061C ABM1P47146 123 aa6.15□□□□□ -1.42
SNP1YIL061C RAV2Q03956 351 aa6.15□□□□□ -1.42
SNP1YIL061C YOR105WQ08504 108 aa6.15□□□□□ -1.42
SNP1YIL061C ATX2Q12067 313 aa6.15□□□□□ -1.42
SNP1YIL061C MRS1P07266 363 aa6.14□□□□□ -1.43
SNP1YIL061C DDI2P0CH63 225 aa6.14□□□□□ -1.43
SNP1YIL061C DDI3P0CH64 225 aa6.14□□□□□ -1.43
SNP1YIL061C VMA11P32842 164 aa6.14□□□□□ -1.43
SNP1YIL061C YKL075CP36083 450 aa6.14□□□□□ -1.43
SNP1YIL061C DAD2P36162 133 aa6.14□□□□□ -1.43
SNP1YIL061C GPP2P40106 250 aaKnown RBP6.14□□□□□ -1.43
SNP1YIL061C IMP2P46972 177 aa6.14□□□□□ -1.43
SNP1YIL061C CGR1P53188 120 aa6.14□□□□□ -1.43
SNP1YIL061C YNR034W-AQ3E841 98 aa6.14□□□□□ -1.43
SNP1YIL061C YLR302CO13544 120 aa6.13□□□□□ -1.43
SNP1YIL061C COX2P00410 251 aa6.13□□□□□ -1.43
SNP1YIL061C POR1P04840 283 aaKnown RBP6.13□□□□□ -1.43
SNP1YIL061C YBR090CP38253 122 aa6.13□□□□□ -1.43
SNP1YIL061C YMR317WQ04893 1140 aa6.13□□□□□ -1.43
SNP1YIL061C Q0297Q9ZZV8 51 aa6.13□□□□□ -1.43
SNP1YIL061C HMRA1P0CY11 126 aa6.12□□□□□ -1.43
SNP1YIL061C MRPL38P35996 138 aaPredicted RBP6.12□□□□□ -1.43
SNP1YIL061C MIX23P38162 196 aa6.12□□□□□ -1.43
SNP1YIL061C GLE2P40066 365 aa6.12□□□□□ -1.43
SNP1YIL061C LSM4P40070 187 aaKnown RBP6.12□□□□□ -1.43
SNP1YIL061C YJL027CP47063 138 aaPredicted RBP6.12□□□□□ -1.43
SNP1YIL061C TOM7P53507 60 aa6.12□□□□□ -1.43
SNP1YIL061C TMA17Q12513 150 aa6.12□□□□□ -1.43
SNP1YIL061C YCL001W-BQ96VH2 84 aa6.12□□□□□ -1.43
SNP1YIL061C URA2P07259 2214 aaKnown RBP6.11□□□□□ -1.43
SNP1YIL061C RPL43AP0CX25 92 aaKnown RBP6.11□□□□□ -1.43
SNP1YIL061C RPL43BP0CX26 92 aa6.11□□□□□ -1.43
SNP1YIL061C YPS1P32329 569 aa6.11□□□□□ -1.43
SNP1YIL061C YPT10P38146 199 aa6.11□□□□□ -1.43
SNP1YIL061C WWM1P43582 211 aaKnown RBP6.11□□□□□ -1.43
SNP1YIL061C SWT21P53873 357 aaPredicted RBP6.11□□□□□ -1.43
SNP1YIL061C YMR166CQ03829 368 aa6.11□□□□□ -1.43
SNP1YIL061C SEN15Q04675 128 aa6.11□□□□□ -1.43
SNP1YIL061C PBP4Q07362 185 aaKnown RBP6.11□□□□□ -1.43
SNP1YIL061C COA6Q3E846 104 aa6.11□□□□□ -1.43
SNP1YIL061C PAM17P36147 197 aa6.1□□□□□ -1.43
SNP1YIL061C YDL183CP48569 320 aa6.1□□□□□ -1.43
SNP1YIL061C YGR219WP53307 113 aa6.1□□□□□ -1.43
SNP1YIL061C GIM5Q04493 163 aa6.1□□□□□ -1.43
SNP1YIL061C IRC23Q08416 157 aa6.1□□□□□ -1.43
SNP1YIL061C RPS22BQ3E7Y3 130 aaKnown RBP6.1□□□□□ -1.43
SNP1YIL061C CYC3P06182 269 aa6.09□□□□□ -1.43
SNP1YIL061C CUP2P15315 225 aa6.09□□□□□ -1.43
SNP1YIL061C TIR2P33890 251 aa6.09□□□□□ -1.43
SNP1YIL061C RPB11P38902 120 aa6.09□□□□□ -1.43
SNP1YIL061C HUA1P40325 198 aa6.09□□□□□ -1.43
SNP1YIL061C OST3P48439 350 aa6.09□□□□□ -1.43
SNP1YIL061C ERV14P53173 138 aa6.09□□□□□ -1.43
SNP1YIL061C TIM18Q08749 192 aa6.09□□□□□ -1.43
SNP1YIL061C HTB2P02294 131 aa6.08□□□□□ -1.44
SNP1YIL061C FZF1P32805 299 aa6.08□□□□□ -1.44
SNP1YIL061C AME1P38313 324 aa6.08□□□□□ -1.44
SNP1YIL061C AIM24P47127 394 aa6.08□□□□□ -1.44
SNP1YIL061C COX18P53239 316 aa6.08□□□□□ -1.44
SNP1YIL061C YML122CQ03207 126 aa6.08□□□□□ -1.44
SNP1YIL061C ATG33Q06485 197 aa6.08□□□□□ -1.44
SNP1YIL061C LSO2Q3E772 92 aaKnown RBP6.08□□□□□ -1.44
SNP1YIL061C YCR024C-BQ3E7Z8 88 aa6.08□□□□□ -1.44
SNP1YIL061C MRPL20P22354 195 aaPredicted RBP6.07□□□□□ -1.44
SNP1YIL061C MBB1P39534 108 aa6.07□□□□□ -1.44
SNP1YIL061C YIL077CP40508 320 aa6.07□□□□□ -1.44
SNP1YIL061C IZH1Q03419 316 aa6.07□□□□□ -1.44
SNP1YIL061C YIL134C-AQ45U18 67 aa6.07□□□□□ -1.44
SNP1YIL061C MRPL31P14063 131 aaPredicted RBP6.06□□□□□ -1.44
SNP1YIL061C ERS1P17261 260 aa6.06□□□□□ -1.44
SNP1YIL061C FEN2P25621 512 aaKnown RBP6.06□□□□□ -1.44
SNP1YIL061C TRI1Q05024 226 aa6.06□□□□□ -1.44
SNP1YIL061C RPL31BP0C2H9 113 aaKnown RBP6.05□□□□□ -1.44
SNP1YIL061C YER190C-BP0CX94 160 aa6.05□□□□□ -1.44
SNP1YIL061C YEL077W-AP0CX95 160 aa6.05□□□□□ -1.44
SNP1YIL061C YGR296C-BP0CX96 160 aa6.05□□□□□ -1.44
SNP1YIL061C YPL283W-BP0CX97 160 aa6.05□□□□□ -1.44
SNP1YIL061C YPR204C-AP0CX98 160 aa6.05□□□□□ -1.44
SNP1YIL061C PRS4P38063 326 aaPredicted RBP6.05□□□□□ -1.44
SNP1YIL061C MIC12P38341 106 aa6.05□□□□□ -1.44
SNP1YIL061C SNU13P39990 126 aaKnown RBP6.05□□□□□ -1.44
SNP1YIL061C POR2P40478 281 aa6.05□□□□□ -1.44
SNP1YIL061C YFR045WP43617 309 aa6.05□□□□□ -1.44
SNP1YIL061C DAD4P69851 72 aa6.05□□□□□ -1.44
SNP1YIL061C ERG27Q12452 347 aaKnown RBP6.05□□□□□ -1.44
SNP1YIL061C INO2P26798 304 aa6.04□□□□□ -1.44
SNP1YIL061C YKL102CP34249 101 aa6.04□□□□□ -1.44
SNP1YIL061C MRPL11P36521 249 aaPredicted RBP6.04□□□□□ -1.44
SNP1YIL061C YMR141CP40211 102 aa6.04□□□□□ -1.44
SNP1YIL061C RPA43P46669 326 aa6.04□□□□□ -1.44
SNP1YIL061C DUG3P53871 357 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms