RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C UBC6P33296 250 aaPredicted RBP0.49□□□□□ -2.33
SWI5YDR146C YER181CP40097 107 aa0.49□□□□□ -2.33
SWI5YDR146C VAM10Q08474 114 aa0.49□□□□□ -2.33
SWI5YDR146C NSL1Q12143 216 aa0.49□□□□□ -2.33
SWI5YDR146C IPT1P38954 527 aa0.48□□□□□ -2.33
SWI5YDR146C FMN1Q03778 218 aa0.48□□□□□ -2.33
SWI5YDR146C RFU1Q08003 200 aa0.48□□□□□ -2.33
SWI5YDR146C EFG1Q3E705 233 aaKnown RBP0.48□□□□□ -2.33
SWI5YDR146C SPA2P23201 1466 aaKnown RBP0.48□□□□□ -2.33
SWI5YDR146C PRP8P33334 2413 aaKnown RBP0.48□□□□□ -2.33
SWI5YDR146C DDR48P18899 430 aaKnown RBP0.47□□□□□ -2.33
SWI5YDR146C PHO13P19881 312 aa0.47□□□□□ -2.33
SWI5YDR146C ECM31P38122 312 aa0.47□□□□□ -2.33
SWI5YDR146C DIE2P50076 525 aa0.47□□□□□ -2.33
SWI5YDR146C RCF2P53721 224 aa0.47□□□□□ -2.33
SWI5YDR146C UBR1P19812 1950 aa0.47□□□□□ -2.33
SWI5YDR146C MRPL24P36525 258 aaPredicted RBP0.47□□□□□ -2.33
SWI5YDR146C AME1P38313 324 aa0.47□□□□□ -2.33
SWI5YDR146C YJL218WP40892 196 aaKnown RBP0.47□□□□□ -2.33
SWI5YDR146C MAK3Q03503 176 aa0.47□□□□□ -2.33
SWI5YDR146C YPD1Q07688 167 aa0.47□□□□□ -2.33
SWI5YDR146C SCS22Q6Q595 175 aa0.47□□□□□ -2.33
SWI5YDR146C QCR2P07257 368 aa0.46□□□□□ -2.34
SWI5YDR146C PEX34P25584 144 aa0.46□□□□□ -2.34
SWI5YDR146C ROM2P51862 1356 aaKnown RBP0.46□□□□□ -2.34
SWI5YDR146C YHR213W-BQ8TGK1 99 aa0.46□□□□□ -2.34
SWI5YDR146C HYP2P23301 157 aaKnown RBP0.45□□□□□ -2.34
SWI5YDR146C RME1P32338 300 aaKnown RBP0.45□□□□□ -2.34
SWI5YDR146C YGL193CP53097 103 aa0.45□□□□□ -2.34
SWI5YDR146C HSL1P34244 1518 aa0.45□□□□□ -2.34
SWI5YDR146C COX5BP00425 151 aa0.44□□□□□ -2.34
SWI5YDR146C RPL33AP05744 107 aaKnown RBP0.44□□□□□ -2.34
SWI5YDR146C DER1P38307 211 aa0.44□□□□□ -2.34
SWI5YDR146C YNL122CP53921 115 aaPredicted RBP0.44□□□□□ -2.34
SWI5YDR146C YDR476CQ03362 224 aa0.44□□□□□ -2.34
SWI5YDR146C GPI11Q06636 219 aa0.44□□□□□ -2.34
SWI5YDR146C HAP2P06774 265 aa0.44□□□□□ -2.34
SWI5YDR146C VMA10P48836 114 aaKnown RBP0.44□□□□□ -2.34
SWI5YDR146C YCL001W-AP87012 153 aa0.44□□□□□ -2.34
SWI5YDR146C MHF1Q3E835 90 aa0.44□□□□□ -2.34
SWI5YDR146C YGL041W-AP0C5N3 154 aa0.43□□□□□ -2.34
SWI5YDR146C SED1Q01589 338 aa0.43□□□□□ -2.34
SWI5YDR146C MGR2Q02889 113 aa0.43□□□□□ -2.34
SWI5YDR146C YPR153WQ06537 140 aa0.43□□□□□ -2.34
SWI5YDR146C LAA1P39526 2014 aa0.43□□□□□ -2.34
SWI5YDR146C RPS22AP0C0W1 130 aaKnown RBP0.43□□□□□ -2.34
SWI5YDR146C YGL014C-AP0C5N1 53 aa0.43□□□□□ -2.34
SWI5YDR146C PBI2P0CT04 75 aaKnown RBP0.43□□□□□ -2.34
SWI5YDR146C BUB2P26448 306 aaPredicted RBP0.43□□□□□ -2.34
SWI5YDR146C GPI2P46961 280 aa0.43□□□□□ -2.34
SWI5YDR146C TLG1Q03322 224 aa0.43□□□□□ -2.34
SWI5YDR146C RPS22BQ3E7Y3 130 aaKnown RBP0.43□□□□□ -2.34
SWI5YDR146C GSC2P40989 1895 aa0.42□□□□□ -2.34
SWI5YDR146C NHP6AP11632 93 aaKnown RBP0.42□□□□□ -2.34
SWI5YDR146C SMD2Q06217 110 aaKnown RBP0.42□□□□□ -2.34
SWI5YDR146C RRT7Q07829 113 aa0.42□□□□□ -2.34
SWI5YDR146C YOR072WQ08486 104 aa0.42□□□□□ -2.34
SWI5YDR146C PRM3Q08931 133 aa0.42□□□□□ -2.34
SWI5YDR146C RPS28BP0C0X0 67 aaKnown RBP0.41□□□□□ -2.34
SWI5YDR146C FYV5P25585 152 aa0.41□□□□□ -2.34
SWI5YDR146C YHR140WP38842 239 aa0.41□□□□□ -2.34
SWI5YDR146C YMR141CP40211 102 aa0.41□□□□□ -2.34
SWI5YDR146C YGR201CP42936 225 aa0.41□□□□□ -2.34
SWI5YDR146C ATP19P81451 68 aa0.41□□□□□ -2.34
SWI5YDR146C EST3Q03096 181 aa0.41□□□□□ -2.34
SWI5YDR146C RPS28AQ3E7X9 67 aaPredicted RBP0.41□□□□□ -2.34
SWI5YDR146C HSP12P22943 109 aaKnown RBP0.41□□□□□ -2.34
SWI5YDR146C RPL43AP0CX25 92 aaKnown RBP0.4□□□□□ -2.35
SWI5YDR146C RPL43BP0CX26 92 aa0.4□□□□□ -2.35
SWI5YDR146C RPS1BP23248 255 aaKnown RBP0.4□□□□□ -2.35
SWI5YDR146C FIG1P38224 298 aa0.4□□□□□ -2.35
SWI5YDR146C MVB12P42939 101 aa0.4□□□□□ -2.35
SWI5YDR146C PET20Q99373 253 aa0.4□□□□□ -2.35
SWI5YDR146C RPL40AP0CH08 128 aaKnown RBP0.39□□□□□ -2.35
SWI5YDR146C RPL40BP0CH09 128 aaKnown RBP0.39□□□□□ -2.35
SWI5YDR146C IPI1P38803 334 aaPredicted RBP0.39□□□□□ -2.35
SWI5YDR146C YMR122CQ03879 124 aa0.39□□□□□ -2.35
SWI5YDR146C MOG1P47123 218 aa0.38□□□□□ -2.35
SWI5YDR146C YNL019CP53975 284 aa0.38□□□□□ -2.35
SWI5YDR146C UTP11P34247 250 aaPredicted RBP0.38□□□□□ -2.35
SWI5YDR146C PHB1P40961 287 aa0.38□□□□□ -2.35
SWI5YDR146C IRC21Q04772 201 aa0.38□□□□□ -2.35
SWI5YDR146C YMR320WQ04897 101 aa0.38□□□□□ -2.35
SWI5YDR146C SOM1Q05676 74 aa0.38□□□□□ -2.35
SWI5YDR146C KTI11Q3E840 82 aa0.38□□□□□ -2.35
SWI5YDR146C AIM4P38305 123 aaPredicted RBP0.37□□□□□ -2.35
SWI5YDR146C YLR307C-AQ3E825 87 aa0.37□□□□□ -2.35
SWI5YDR146C FUN14P18411 198 aa0.37□□□□□ -2.35
SWI5YDR146C LST8P41318 303 aa0.37□□□□□ -2.35
SWI5YDR146C PKR1Q03880 122 aaKnown RBP0.37□□□□□ -2.35
SWI5YDR146C HUT1Q12520 339 aa0.37□□□□□ -2.35
SWI5YDR146C YLR157W-EP0CF00 54 aa0.36□□□□□ -2.35
SWI5YDR146C NMT1P14743 455 aa0.36□□□□□ -2.35
SWI5YDR146C YGL149WP53116 101 aa0.36□□□□□ -2.35
SWI5YDR146C YPL067CQ02754 198 aa0.36□□□□□ -2.35
SWI5YDR146C RAV2Q03956 351 aa0.36□□□□□ -2.35
SWI5YDR146C COA4Q05809 96 aa0.36□□□□□ -2.35
SWI5YDR146C YOR385WQ08909 290 aa0.36□□□□□ -2.35
SWI5YDR146C ARC19P33204 171 aaKnown RBP0.35□□□□□ -2.35
SWI5YDR146C RPS1AP33442 255 aaKnown RBP0.35□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms