RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	DIE2	P50076	525 aa		0.3	□□□□□ -2.36
UBS1	YBR165W	YLR046C	Q12253	270 aa		0.3	□□□□□ -2.36
UBS1	YBR165W	SRP21	P32342	167 aa		0.29	□□□□□ -2.36
UBS1	YBR165W	IRC19	Q07843	230 aa		0.29	□□□□□ -2.36
UBS1	YBR165W	SPA2	P23201	1466 aa	Known RBP	0.29	□□□□□ -2.36
UBS1	YBR165W	HSL1	P34244	1518 aa		0.28	□□□□□ -2.36
UBS1	YBR165W	YGL041W-A	P0C5N3	154 aa		0.28	□□□□□ -2.36
UBS1	YBR165W	ORM1	P53224	222 aa		0.28	□□□□□ -2.36
UBS1	YBR165W	RPL35A	P0CX84	120 aa	Known RBP	0.27	□□□□□ -2.37
UBS1	YBR165W	RPL35B	P0CX85	120 aa	Known RBP	0.27	□□□□□ -2.37
UBS1	YBR165W	FES1	P38260	290 aa		0.27	□□□□□ -2.37
UBS1	YBR165W	MVB12	P42939	101 aa		0.27	□□□□□ -2.37
UBS1	YBR165W	GPI11	Q06636	219 aa		0.27	□□□□□ -2.37
UBS1	YBR165W	UBI4	P0CG63	381 aa	Known RBP	0.25	□□□□□ -2.37
UBS1	YBR165W	IRC21	Q04772	201 aa		0.25	□□□□□ -2.37
UBS1	YBR165W	RFU1	Q08003	200 aa		0.25	□□□□□ -2.37
UBS1	YBR165W	YJL009W	P47078	108 aa		0.24	□□□□□ -2.37
UBS1	YBR165W	DLS1	P40366	167 aa		0.23	□□□□□ -2.37
UBS1	YBR165W	LSM3	P57743	89 aa	Known RBP	0.23	□□□□□ -2.37
UBS1	YBR165W	MHF1	Q3E835	90 aa		0.23	□□□□□ -2.37
UBS1	YBR165W	YPR153W	Q06537	140 aa		0.22	□□□□□ -2.37
UBS1	YBR165W	RDI1	Q12434	202 aa		0.22	□□□□□ -2.37
UBS1	YBR165W	YOR034C-A	Q3E735	80 aa		0.22	□□□□□ -2.37
UBS1	YBR165W	YGL014C-A	P0C5N1	53 aa		0.2	□□□□□ -2.38
UBS1	YBR165W	FIP1	P45976	327 aa		0.2	□□□□□ -2.38
UBS1	YBR165W	VMA10	P48836	114 aa	Known RBP	0.2	□□□□□ -2.38
UBS1	YBR165W	EST3	Q03096	181 aa		0.2	□□□□□ -2.38
UBS1	YBR165W	LAA1	P39526	2014 aa		0.2	□□□□□ -2.38
UBS1	YBR165W	NHP6A	P11632	93 aa	Known RBP	0.19	□□□□□ -2.38
UBS1	YBR165W	RPL30	P14120	105 aa	Known RBP	0.19	□□□□□ -2.38
UBS1	YBR165W	PEX34	P25584	144 aa		0.19	□□□□□ -2.38
UBS1	YBR165W	GPI2	P46961	280 aa		0.19	□□□□□ -2.38
UBS1	YBR165W	YGL193C	P53097	103 aa		0.18	□□□□□ -2.38
UBS1	YBR165W	ATP19	P81451	68 aa		0.18	□□□□□ -2.38
UBS1	YBR165W	YMR321C	Q04898	105 aa		0.18	□□□□□ -2.38
UBS1	YBR165W	YLR053C	Q12026	108 aa		0.18	□□□□□ -2.38
UBS1	YBR165W	PHO13	P19881	312 aa		0.17	□□□□□ -2.38
UBS1	YBR165W	YPD1	Q07688	167 aa		0.17	□□□□□ -2.38
UBS1	YBR165W	COA6	Q3E846	104 aa		0.17	□□□□□ -2.38
UBS1	YBR165W	SCS22	Q6Q595	175 aa		0.17	□□□□□ -2.38
UBS1	YBR165W	HUG1	Q6Q5K6	68 aa		0.17	□□□□□ -2.38
UBS1	YBR165W	ATG38	Q05789	226 aa	Known RBP	0.16	□□□□□ -2.38
UBS1	YBR165W	SRL3	P36167	246 aa		0.15	□□□□□ -2.39
UBS1	YBR165W	YMR122C	Q03879	124 aa		0.15	□□□□□ -2.39
UBS1	YBR165W	YER121W	P40076	114 aa		0.14	□□□□□ -2.39
UBS1	YBR165W	YER181C	P40097	107 aa		0.14	□□□□□ -2.39
UBS1	YBR165W	APQ12	P40532	138 aa		0.14	□□□□□ -2.39
UBS1	YBR165W	GIM5	Q04493	163 aa		0.14	□□□□□ -2.39
UBS1	YBR165W	DDR48	P18899	430 aa	Known RBP	0.13	□□□□□ -2.39
UBS1	YBR165W	MAK3	Q03503	176 aa		0.13	□□□□□ -2.39
UBS1	YBR165W	RRT7	Q07829	113 aa		0.13	□□□□□ -2.39
UBS1	YBR165W	VPS51	P36116	164 aa		0.12	□□□□□ -2.39
UBS1	YBR165W	YPR202W	Q08993	238 aa		0.12	□□□□□ -2.39
UBS1	YBR165W	KTI11	Q3E840	82 aa		0.12	□□□□□ -2.39
UBS1	YBR165W	COX5B	P00425	151 aa		0.11	□□□□□ -2.39
UBS1	YBR165W	MRPL24	P36525	258 aa	Predicted RBP	0.11	□□□□□ -2.39
UBS1	YBR165W	YDR476C	Q03362	224 aa		0.11	□□□□□ -2.39
UBS1	YBR165W	YJL218W	P40892	196 aa	Known RBP	0.09	□□□□□ -2.4
UBS1	YBR165W	YNL019C	P53975	284 aa		0.09	□□□□□ -2.4
UBS1	YBR165W	YCL001W-A	P87012	153 aa		0.09	□□□□□ -2.4
UBS1	YBR165W	FIT3	Q08907	204 aa		0.09	□□□□□ -2.4
UBS1	YBR165W	URA2	P07259	2214 aa	Known RBP	0.09	□□□□□ -2.4
UBS1	YBR165W	IPI1	P38803	334 aa	Predicted RBP	0.08	□□□□□ -2.4
UBS1	YBR165W	LST8	P41318	303 aa		0.08	□□□□□ -2.4
UBS1	YBR165W	SLM6	P38343	150 aa		0.07	□□□□□ -2.4
UBS1	YBR165W	HUT1	Q12520	339 aa		0.07	□□□□□ -2.4
UBS1	YBR165W	EMC4	P53073	190 aa		0.06	□□□□□ -2.4
UBS1	YBR165W	COA4	Q05809	96 aa		0.06	□□□□□ -2.4
UBS1	YBR165W	BLM10	P43583	2143 aa		0.05	□□□□□ -2.4
UBS1	YBR165W	PBI2	P0CT04	75 aa	Known RBP	0.03	□□□□□ -2.4
UBS1	YBR165W	FUN14	P18411	198 aa		0.03	□□□□□ -2.4
UBS1	YBR165W	FYV5	P25585	152 aa		0.03	□□□□□ -2.4
UBS1	YBR165W	NMT1	P14743	455 aa		0.02	□□□□□ -2.41
UBS1	YBR165W	YBR013C	P38215	129 aa		0.02	□□□□□ -2.41
UBS1	YBR165W	UBR1	P19812	1950 aa		0.01	□□□□□ -2.41
UBS1	YBR165W	MIC27	P50945	234 aa		0.01	□□□□□ -2.41
UBS1	YBR165W	EFG1	Q3E705	233 aa	Known RBP	0.01	□□□□□ -2.41
UBS1	YBR165W	SNF2	P22082	1703 aa		0	□□□□□ -2.41
UBS1	YBR165W	UTP11	P34247	250 aa	Predicted RBP	0	□□□□□ -2.41
UBS1	YBR165W	RPL40A	P0CH08	128 aa	Known RBP	-0.01	□□□□□ -2.41
UBS1	YBR165W	RPL40B	P0CH09	128 aa	Known RBP	-0.01	□□□□□ -2.41
UBS1	YBR165W	YHR213W	P0CI67	198 aa		-0.01	□□□□□ -2.41
UBS1	YBR165W	RPS1B	P23248	255 aa	Known RBP	-0.01	□□□□□ -2.41
UBS1	YBR165W	RPS29B	P41058	56 aa	Known RBP	-0.01	□□□□□ -2.41
UBS1	YBR165W	NSL1	Q12143	216 aa		-0.01	□□□□□ -2.41
UBS1	YBR165W	GSC2	P40989	1895 aa		-0.02	□□□□□ -2.41
UBS1	YBR165W	ANB1	P19211	157 aa		-0.03	□□□□□ -2.41
UBS1	YBR165W	HSP12	P22943	109 aa	Known RBP	-0.03	□□□□□ -2.41
UBS1	YBR165W	PHB1	P40961	287 aa		-0.03	□□□□□ -2.41
UBS1	YBR165W	CMC2	Q3E7A4	109 aa		-0.03	□□□□□ -2.41
UBS1	YBR165W	QCR2	P07257	368 aa		-0.04	□□□□□ -2.42
UBS1	YBR165W	AIM4	P38305	123 aa	Predicted RBP	-0.04	□□□□□ -2.42
UBS1	YBR165W	TAO3	P40468	2376 aa		-0.04	□□□□□ -2.42
UBS1	YBR165W	BUB2	P26448	306 aa	Predicted RBP	-0.05	□□□□□ -2.42
UBS1	YBR165W	NAT5	Q08689	176 aa		-0.06	□□□□□ -2.42
UBS1	YBR165W	SAC3	P46674	1301 aa		-0.07	□□□□□ -2.42
UBS1	YBR165W	YPL067C	Q02754	198 aa		-0.07	□□□□□ -2.42
UBS1	YBR165W	SOM1	Q05676	74 aa		-0.07	□□□□□ -2.42
UBS1	YBR165W	RPS28B	P0C0X0	67 aa	Known RBP	-0.08	□□□□□ -2.42
UBS1	YBR165W	AME1	P38313	324 aa		-0.08	□□□□□ -2.42

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms