RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 AK5Q9Y6K8 562 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ABCA8O94911 1581 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ZMYM6O95789 1325 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 KLHL18O94889 574 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 APODP05090 189 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 AXLP30530 894 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CSTF3Q12996 717 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PRUNE1Q86TP1 453 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 GPKOWQ92917 476 aaPredicted RBP eCLIP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TUBGCP3Q96CW5 907 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RIC8BQ9NVN3 520 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PCDHGB5Q9Y5G0 923 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RAD54BQ9Y620 910 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 COL15A1P39059 1388 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 LDOC1O95751 146 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CYP17A1P05093 508 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 FGFR1P11362 822 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 SLC16A2P36021 539 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 OCA2Q04671 838 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CDC16Q13042 620 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF827Q17R98 1081 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TAF2Q6P1X5 1199 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 HHIPL2Q6UWX4 724 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CXorf40AQ8TE69 158 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 MEIS3Q99687 375 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TMEM2Q9UHN6 1383 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 KCNJ18B7U540 433 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 AP3D1O14617 1153 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 STX7O15400 261 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 IFNA16P05015 189 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 KCNJ12Q14500 433 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RUBCNQ92622 972 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 FAM20AQ96MK3 541 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 INTS13Q9NVM9 706 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PTPN22Q9Y2R2 807 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CASKO14936 926 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 NR1D1P20393 614 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 POLR2FP61218 127 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CBX3Q13185 183 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 LINC00523Q86TU6 105 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CYP4X1Q8N118 509 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 KLHL23Q8NBE8 558 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 XXYLT1Q8NBI6 393 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 SLC13A1Q9BZW2 595 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 MIEF1Q9NQG6 463 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 IP6K2Q9UHH9 426 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 INTUQ9ULD6 942 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 C16orf96A6NNT2 1141 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CACNB4O00305 520 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 LRRN2O75325 713 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PLGP00747 810 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 FKBP1BP68106 108 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 MORC3Q14149 939 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CTTNQ14247 550 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 STAT4Q14765 748 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 UAP1L1Q3KQV9 507 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 SETMARQ53H47 684 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 GALNT18Q6P9A2 607 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 APOA1P02647 267 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ASGR1P07306 291 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 GRSF1Q12849 480 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 NEK10Q6ZWH5 1172 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PCIF1Q9H4Z3 704 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ZFATQ9P243 1243 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TSR3Q9UJK0 312 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 STARD13Q9Y3M8 1113 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF608Q9ULD9 1512 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 SLC28A2O43868 658 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 NOS3P29474 1203 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 HOXA13P31271 388 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 C6orf10Q5SRN2 563 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TMEM270Q6UE05 265 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 SLC24A3Q9HC58 644 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TAB2Q9NYJ8 693 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RBAKQ9NYW8 714 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ADAM22Q9P0K1 906 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 CYTH1Q15438 398 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PHC3Q8NDX5 983 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 MAGOHBQ96A72 148 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 APOL5Q9BWW9 433 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RNF26Q9BY78 433 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ABCC2Q92887 1545 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PFKPQ01813 784 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RUNX1T1Q06455 604 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 ORC2Q13416 577 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 MTFR2Q6P444 385 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 PADI6Q6TGC4 694 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 RHOT2Q8IXI1 618 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 AVL9Q8NBF6 648 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 DBNDD2Q9BQY9 259 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 WWOXQ9NZC7 414 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TRIM16O95361 564 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 C6P13671 934 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 EIF4A3P38919 411 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 LEMD2Q8NC56 503 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 SERPINB12Q96P63 405 aa6.55□□□□□ -1.36
CDKL5-205ENST00000623535 TTYH1Q9H313 450 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 DHX35Q9H5Z1 703 aaKnown RBP6.55□□□□□ -1.36
CDKL5-205ENST00000623535 NLRP1Q9C000 1473 aa6.54□□□□□ -1.36
CDKL5-205ENST00000623535 MAPK13O15264 365 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms