RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ATP2A1O14983 1001 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ADCY3O60266 1144 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ATG7O95352 703 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ITGAVP06756 1048 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ALADP13716 330 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 CCNB1P14635 433 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 KRT4P19013 534 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 CTCFP49711 727 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 OAZ1P54368 228 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 OSTNP61366 133 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ACVR2BQ13705 512 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 TFDP1Q14186 410 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PIGHQ14442 188 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 SETDB1Q15047 1291 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 HIF1AQ16665 826 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 MSS51Q4VC12 460 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 FNBP1LQ5T0N5 605 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 CEP120Q8N960 986 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 LRRC8CQ8TDW0 803 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 FBF1Q8TES7 1133 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 TMEM237Q96Q45 408 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 WDR91A4D1P6 747 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 MAGEB2O15479 319 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 CST8O60676 142 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 STAM2O75886 525 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 LSM8O95777 96 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 FGFR1P11362 822 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PSMA2P25787 234 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 TARSP26639 723 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 IL1R2P27930 398 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ZNF280AP59817 542 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 OTUD4Q01804 1114 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 TRPC3Q13507 836 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 CCDC142Q17RM4 750 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 HHATQ5VTY9 493 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 TLDC1Q6P9B6 456 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 C3orf62Q6ZUJ4 267 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 DEFB132Q7Z7B7 95 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 EGFL6Q8IUX8 553 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 WDR49Q8IV35 697 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 BRSK2Q8IWQ3 736 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 ACTL9Q8TC94 416 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PYROXD1Q8WU10 500 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 NKD2Q969F2 451 aaPredicted RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 LRRC37BQ96QE4 947 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PCYT2Q99447 389 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 NIFKQ9BYG3 293 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 NIF3L1Q9GZT8 377 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 VPS33BQ9H267 617 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 C12orf65Q9H3J6 166 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 PCDH9Q9HC56 1237 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 DDX56Q9NY93 547 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
C11orf54-215ENST00000617482 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
C11orf54-215ENST00000617482 C3orf70A6NLC5 250 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 GOLGA8RI6L899 631 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 FAM189A1O60320 539 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CD48P09326 243 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 GEMIN4P57678 1058 aaKnown RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 ORC1Q13415 861 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 MOGSQ13724 837 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 PDK4Q16654 411 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 DUOXA2Q1HG44 320 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 SGSM1Q2NKQ1 1148 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 DENND1BQ6P3S1 775 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 LVRNQ6Q4G3 990 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CATSPERGQ6ZRH7 1159 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 EEPD1Q7L9B9 569 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CDR2LQ86X02 465 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 RHPN2Q8IUC4 686 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 KIAA0319LQ8IZA0 1049 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 ARFGAP1Q8N6T3 406 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 JOSD2Q8TAC2 188 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 SLC35B2Q8TB61 432 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 PSMC3IPQ9P2W1 217 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 PCSK1NQ9UHG2 260 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 RABGEF1Q9UJ41 708 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 SMG5Q9UPR3 1016 aaKnown RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 SHOC2Q9UQ13 582 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 WDR81Q562E7 1941 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 CLUHO75153 1309 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 TCRBV7S3A2A0A539 114 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 TYROBPO43914 113 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 EDF1O60869 148 aaKnown RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 DIAPH2O60879 1101 aa12.4□□□□□ -0.42
C11orf54-215ENST00000617482 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-215ENST00000617482 KRT3P12035 628 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms