RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 CKBP12277 381 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 CKMT1AP12532 417 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 PI3P19957 117 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 G3BP1Q13283 466 aaKnown RBP eCLIP5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SSPNQ14714 243 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 INSCQ1MX18 579 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 PLAG1Q6DJT9 500 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 FCRL6Q6DN72 434 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 RETSATQ6NUM9 610 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 XYLT1Q86Y38 959 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SIAH1Q8IUQ4 282 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SHCBP1Q8NEM2 672 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SLC30A5Q8TAD4 765 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 TBC1D15Q8TC07 691 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SMCR8Q8TEV9 937 aaPredicted RBP5.93□□□□□ -1.46
LINC00397-202ENST00000606785 TFAP2CQ92754 450 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 MOGAT1Q96PD6 335 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SEC62Q99442 399 aaKnown RBP5.93□□□□□ -1.46
LINC00397-202ENST00000606785 MESP1Q9BRJ9 268 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 UNC45AQ9H3U1 944 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 MSL2Q9HCI7 577 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 SAYSD1Q9NPB0 183 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 ZSCAN32Q9NX65 697 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 KIF17Q9P2E2 1029 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 HESX1Q9UBX0 185 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 ZMYND8Q9ULU4 1186 aaPredicted RBP5.93□□□□□ -1.46
LINC00397-202ENST00000606785 TBC1D30Q9Y2I9 924 aa5.93□□□□□ -1.46
LINC00397-202ENST00000606785 A0A0B4J269 797 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 ETV2O00321 342 aaPredicted RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 FAM155BO75949 473 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 NPPBP16860 134 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 TPH1P17752 444 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 GLDCP23378 1020 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 SLC6A2P23975 617 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 NPY5RQ15761 445 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 SLC5A9Q2M3M2 681 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 ADCK5Q3MIX3 580 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 PLA1AQ53H76 456 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 TMTC4Q5T4D3 741 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 RAP1GAP2Q684P5 730 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 KLHL17Q6TDP4 642 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 GPRIN1Q7Z2K8 1008 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 FAM83AQ86UY5 434 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 LRRTM4Q86VH4 590 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 CCDC28AQ8IWP9 274 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 KBTBD2Q8IY47 623 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 FTSJ3Q8IY81 847 aaKnown RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 PDPRQ8NCN5 879 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 ASB12Q8WXK4 309 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 ZNF512Q96ME7 567 aaPredicted RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 PYM1Q9BRP8 204 aaKnown RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 LSM14BQ9BX40 385 aaKnown RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 AGO3Q9H9G7 860 aaKnown RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 WASH6PQ9NQA3 447 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 VPS45Q9NRW7 570 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 GGA3Q9NZ52 723 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 IFT80Q9P2H3 777 aaPredicted RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 DKK4Q9UBT3 224 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 CA14Q9ULX7 337 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
LINC00397-202ENST00000606785 MTO1Q9Y2Z2 717 aaKnown RBP5.92□□□□□ -1.46
LINC00397-202ENST00000606785 AQP7P3A6NL99 342 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 H7C4K7 107 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 FFAR3O14843 346 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 MBD4O95243 580 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 GLP2RO95838 553 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 TSPAN15O95858 294 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 POLBP06746 335 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 CFPP27918 469 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 CST5P28325 142 aaPredicted RBP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 BUD31P41223 144 aaPredicted RBP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 RAP1GAPP47736 663 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 RAC3P60763 192 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 MPP1Q00013 466 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 NSUN2Q08J23 767 aaKnown RBP eCLIP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 EFR3AQ14156 821 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 FAM110CQ1W6H9 321 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 TRIM71Q2Q1W2 868 aaKnown RBP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 FAXCQ5TGI0 409 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 ANKRD45Q5TZF3 282 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 MRNIPQ6NTE8 343 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 FAM111BQ6SJ93 734 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 LCNL1Q6ZST4 164 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 ZNF761Q86XN6 746 aaPredicted RBP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 TMTC1Q8IUR5 882 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 CCDC117Q8IWD4 279 aaPredicted RBP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 SIMC1Q8NDZ2 872 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 UBE2Q2Q8WVN8 375 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 SLC26A6Q9BXS9 759 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 FAM83DQ9H4H8 585 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 MLXIPQ9HAP2 919 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 ZBTB26Q9HCK0 441 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 RIC8AQ9NPQ8 531 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 RASSF1Q9NS23 344 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 MRPS18AQ9NVS2 196 aaKnown RBP5.91□□□□□ -1.46
LINC00397-202ENST00000606785 SLC13A4Q9UKG4 626 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 CLCA2Q9UQC9 943 aa5.91□□□□□ -1.46
LINC00397-202ENST00000606785 ATP11BQ9Y2G3 1177 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms