RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 GTF3C4Q9UKN8 822 aa21■□□□□ 0.95
SHKBP1-214ENST00000597396 SLC27A5Q9Y2P5 690 aa21■□□□□ 0.95
SHKBP1-214ENST00000597396 YIPF1Q9Y548 306 aa21■□□□□ 0.95
SHKBP1-214ENST00000597396 PCDHB5Q9Y5E4 795 aa21■□□□□ 0.95
SHKBP1-214ENST00000597396 SYCE3A1L190 88 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 PMM2O15305 246 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 ATP2C2O75185 946 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 PLD1Q13393 1074 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 MAPRE1Q15691 268 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 MGAT5BQ3V5L5 792 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 ANO6Q4KMQ2 910 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 SPATA2LQ8IUW3 424 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 ELMOD1Q8N336 334 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 SEPT5Q99719 369 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 CRISPLD1Q9H336 500 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 POMKQ9H5K3 350 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 TMLHEQ9NVH6 421 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 HSFX1Q9UBD0 423 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 NOTCH4Q99466 2003 aa20.99■□□□□ 0.95
SHKBP1-214ENST00000597396 MYBPHLA2RUH7 354 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 KCNJ18B7U540 433 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 PAPLNO95428 1278 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 POU2F2P09086 479 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 PRKCSHP14314 528 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 ALDH1A3P47895 512 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 TUFMP49411 452 aaKnown RBP20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 MYL5Q02045 173 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 TWF1Q12792 350 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 LRMPQ12912 555 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 KCNJ12Q14500 433 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 MAN2A1Q16706 1144 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 C4orf50Q6ZRC1 276 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 TTC9BQ8N6N2 239 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 TATDN2Q93075 761 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 FAXDC2Q96IV6 333 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 NT5C1BQ96P26 610 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 PKMYT1Q99640 499 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 PHF7Q9BWX1 381 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 CRTAC1Q9NQ79 661 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 NME7Q9Y5B8 376 aa20.98■□□□□ 0.95
SHKBP1-214ENST00000597396 DOCK8Q8NF50 2099 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 PTPN1P18031 435 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 CD58P19256 250 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 TRIM21P19474 475 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 EPHB3P54753 998 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 CCDC142Q17RM4 750 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 MDH1BQ5I0G3 518 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 FAM171BQ6P995 826 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 GRASPQ7Z6J2 395 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 MYLPFQ96A32 169 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 TNIP3Q96KP6 325 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 DPEP3Q9H4B8 488 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 PRKAG3Q9UGI9 489 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 CLUHO75153 1309 aa20.97■□□□□ 0.95
SHKBP1-214ENST00000597396 PES1O00541 588 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 SOAT2O75908 522 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 HAPLN1P10915 354 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 EEF1GP26641 437 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 NDST1P52848 882 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 CYP27A1Q02318 531 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 IQCEQ6IPM2 695 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 UNC93AQ86WB7 457 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 TTC39CQ8N584 583 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 AOPEPQ8N6M6 819 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 B3GALNT2Q8NCR0 500 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 MYCBPAPQ8TBZ2 947 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 FAM200AQ8TCP9 573 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 ZNF512Q96ME7 567 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 TUBGCP2Q9BSJ2 902 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 DNAI2Q9GZS0 605 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 WDR6Q9NNW5 1121 aaKnown RBP20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 ABCB6Q9NP58 842 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 CD320Q9NPF0 282 aa20.96■□□□□ 0.95
SHKBP1-214ENST00000597396 PTPN2P17706 415 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 TBXAS1P24557 533 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 YWHAEP62258 255 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 INCA1Q0VD86 236 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 CUL2Q13617 745 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 VEPH1Q14D04 833 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 TCP11X2Q5H9J9 407 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 ACOT1Q86TX2 421 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 ADHFE1Q8IWW8 467 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 EHBP1Q8NDI1 1231 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 KHSRPQ92945 711 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 FUBP3Q96I24 572 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 RPGRIP1Q96KN7 1286 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 INTS2Q9H0H0 1204 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 FANCLQ9NW38 375 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 HCFC1R1Q9NWW0 138 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 GCNT4Q9P109 453 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 HMGXB4Q9UGU5 601 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 GREB1Q4ZG55 1949 aa20.95■□□□□ 0.94
SHKBP1-214ENST00000597396 TPM2P07951 284 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 SP100P23497 879 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 CYP2F1P24903 491 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 SSTR3P32745 418 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 NTHL1P78549 312 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 ORC1Q13415 861 aa20.94■□□□□ 0.94
SHKBP1-214ENST00000597396 ZSCAN23Q3MJ62 389 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms