RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 SLC39A5Q6ZMH5 540 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CATSPER3Q86XQ3 398 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 BRSK2Q8IWQ3 736 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 B3GALNT2Q8NCR0 500 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CXorf38Q8TB03 319 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HEXDCQ8WVB3 486 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 SCUBE2Q9NQ36 999 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 DDX43Q9NXZ2 648 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ALS2Q96Q42 1657 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 LRRIQ3A6PVS8 624 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 SFI1A8K8P3 1242 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 SUN1O94901 812 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 IFNB1P01574 187 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 MAGEA9P43362 315 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 NDUFA8P51970 172 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HNRNPH2P55795 449 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PRKAA1Q13131 559 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 WDR45BQ5MNZ6 344 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 FRA10AC1Q70Z53 315 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 STRADAQ7RTN6 431 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 OTOP2Q7RTS6 562 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PRPF39Q86UA1 669 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 RMDN1Q96DB5 314 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TMA16Q96EY4 203 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TSPAN17Q96FV3 270 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CLIC6Q96NY7 704 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TRIM9Q9C026 710 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 FAM96AQ9H5X1 160 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 SFXN1Q9H9B4 322 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 NMRK1Q9NWW6 199 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CNOT8Q9UFF9 292 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 A0A1W2PQC6 194 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 KPNA7A9QM74 516 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 APOL1O14791 398 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 DNTTP04053 509 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 LCP1P13796 627 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 THOP1P52888 689 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 BCAR1P56945 870 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 MDM2Q00987 491 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CACNB1Q02641 598 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 GAD2Q05329 585 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ZDHHC20Q5W0Z9 365 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HDAC7Q8WUI4 952 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HERVK_113Q902F9 699 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 SNX19Q92543 992 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 NUP85Q9BW27 656 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 NDEL1Q9GZM8 345 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 WNT8AQ9H1J5 351 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TLR9Q9NR96 1032 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 SCAF8Q9UPN6 1271 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 STRCQ7RTU9 1775 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 E5RI56 91 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 GOLGA8TH3BQL2 631 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 EEF2KO00418 725 aaKnown RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 RTN2O75298 545 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 H2AFYO75367 372 aaKnown RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 SEC24BO95487 1268 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 ITGAXP20702 1163 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 CD52P31358 61 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 DUSP3P51452 185 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PTK2BQ14289 1009 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PLPP4Q5VZY2 271 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 RBBP8NLQ8NC74 664 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 KCNB2Q92953 911 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 SAAL1Q96ER3 474 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 MFSD14AQ96MC6 490 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 OMDQ99983 421 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 NFKBIZQ9BYH8 718 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 SLC32A1Q9H598 525 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 WDCPQ9H6R7 721 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 FBRSQ9HAH7 460 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 FANCEQ9HB96 536 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 VPS51Q9UID3 782 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 MAN1B1Q9UKM7 699 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 SGK1O00141 431 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 GSTA1P08263 222 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 GSTA2P09210 222 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 NME3Q13232 169 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 GOLGA7BQ2TAP0 167 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 ZNF792Q3KQV3 632 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 CLEC10AQ8IUN9 316 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 RCOR2Q8IZ40 523 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PDIK1LQ8N165 341 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 ZNF655Q8N720 491 aaPredicted RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 PPHLN1Q8NEY8 458 aaKnown RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 MCOLN3Q8TDD5 553 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 AHCYL2Q96HN2 611 aaKnown RBP6.59□□□□□ -1.35
SMAD4-212ENST00000591126 BPIFA3Q9BQP9 254 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 APEX2Q9UBZ4 518 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 SLC13A4Q9UKG4 626 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 ERVW-1Q9UQF0 538 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 SLC12A8A0AV02 714 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 CCDC66A2RUB6 948 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 TBC1D4O60343 1298 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 RHOBTB1O94844 696 aa6.59□□□□□ -1.35
SMAD4-212ENST00000591126 BMP10O95393 424 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms