RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 LSM8O95777 96 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 ITGB3P05106 788 aa10□□□□□ -0.81
VPS25-205ENST00000590339 CFHP08603 1231 aa10□□□□□ -0.81
VPS25-205ENST00000590339 POU3F3P20264 500 aaPredicted RBP10□□□□□ -0.81
VPS25-205ENST00000590339 PAFAH1B1P43034 410 aa10□□□□□ -0.81
VPS25-205ENST00000590339 GATMP50440 423 aa10□□□□□ -0.81
VPS25-205ENST00000590339 GPM6BQ13491 265 aa10□□□□□ -0.81
VPS25-205ENST00000590339 ZBTB6Q15916 424 aa10□□□□□ -0.81
VPS25-205ENST00000590339 PAN2Q504Q3 1202 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 XKR4Q5GH76 650 aa10□□□□□ -0.81
VPS25-205ENST00000590339 ZNF667Q5HYK9 610 aa10□□□□□ -0.81
VPS25-205ENST00000590339 TJAP1Q5JTD0 557 aa10□□□□□ -0.81
VPS25-205ENST00000590339 UBXN11Q5T124 520 aa10□□□□□ -0.81
VPS25-205ENST00000590339 CCDC181Q5TID7 509 aa10□□□□□ -0.81
VPS25-205ENST00000590339 DCAF12L1Q5VU92 463 aa10□□□□□ -0.81
VPS25-205ENST00000590339 NAA35Q5VZE5 725 aa10□□□□□ -0.81
VPS25-205ENST00000590339 CC2D1AQ6P1N0 951 aaPredicted RBP10□□□□□ -0.81
VPS25-205ENST00000590339 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
VPS25-205ENST00000590339 HNRNPLLQ8WVV9 542 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 ATXN2LQ8WWM7 1075 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 MS4A14Q96JA4 679 aa10□□□□□ -0.81
VPS25-205ENST00000590339 VCPIP1Q96JH7 1222 aa10□□□□□ -0.81
VPS25-205ENST00000590339 RPS6KC1Q96S38 1066 aa10□□□□□ -0.81
VPS25-205ENST00000590339 ADAM2Q99965 735 aa10□□□□□ -0.81
VPS25-205ENST00000590339 NUP85Q9BW27 656 aa10□□□□□ -0.81
VPS25-205ENST00000590339 EIF2AQ9BY44 585 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 CARD9Q9H257 536 aa10□□□□□ -0.81
VPS25-205ENST00000590339 CYP3A43Q9HB55 503 aa10□□□□□ -0.81
VPS25-205ENST00000590339 ERVK-5Q9HDB9 667 aa10□□□□□ -0.81
VPS25-205ENST00000590339 CNTN3Q9P232 1028 aa10□□□□□ -0.81
VPS25-205ENST00000590339 CNOT8Q9UFF9 292 aaKnown RBP10□□□□□ -0.81
VPS25-205ENST00000590339 LRFN2Q9ULH4 789 aa10□□□□□ -0.81
VPS25-205ENST00000590339 PCDHB7Q9Y5E2 793 aa10□□□□□ -0.81
VPS25-205ENST00000590339 SQORQ9Y6N5 450 aa10□□□□□ -0.81
VPS25-205ENST00000590339 SCN1AP35498 2009 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 PGRMC1O00264 195 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 THAP12O43422 761 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 MGEA5O60502 916 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 CILPO75339 1184 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 DGKIO75912 1065 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 PAEPP09466 180 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 RHOXF2BP0C7M4 288 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 CTNNA2P26232 953 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 POLR2BP30876 1174 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 CTNNB1P35222 781 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 NSFP46459 744 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 VSNL1P62760 191 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 C1QBPQ07021 282 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 INCA1Q0VD86 236 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 PLEKHA7Q6IQ23 1121 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 ALKAL1Q6UXT8 129 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 SCARA5Q6ZMJ2 495 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 EP400NLQ6ZTU2 488 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 FAM228AQ86W67 206 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 TMEM130Q8N3G9 435 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 WHAMMQ8TF30 809 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 ZNF606Q8WXB4 792 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 CYFIP2Q96F07 1278 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 SAMD11Q96NU1 681 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 RHOXF2Q9BQY4 288 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 NXF3Q9H4D5 531 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 SMYD3Q9H7B4 428 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 RBM12Q9NTZ6 932 aaKnown RBP9.99□□□□□ -0.81
VPS25-205ENST00000590339 SNTG2Q9NY99 539 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 FAM53CQ9NYF3 392 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 ALG6Q9Y672 507 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 TANC1Q9C0D5 1861 aa9.99□□□□□ -0.81
VPS25-205ENST00000590339 TSC2P49815 1807 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 CDH23Q9H251 3354 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 TCRBV5S1A1TA0A578 114 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 BHMG1C9JSJ3 638 aaPredicted RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 H3BNC9 293 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 RECQL4O94761 1208 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 WEE2P0C1S8 567 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 KCNE1P15382 129 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 CD58P19256 250 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 MMP8P22894 467 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 RRM1P23921 792 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 TNFRSF8P28908 595 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 CTNNA1P35221 906 aaKnown RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 BMPR1AP36894 532 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 RAP1GAPP47736 663 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 DNA2P51530 1060 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 KCNQ1P51787 676 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 GUCY2FP51841 1108 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 RAD23BP54727 409 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 GSCP56915 257 aaPredicted RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 RBP5P82980 135 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 PTPROQ16827 1216 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 GLE1Q53GS7 698 aaKnown RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 SPOUT1Q5T280 376 aaKnown RBP9.98□□□□□ -0.81
VPS25-205ENST00000590339 TMCO3Q6UWJ1 677 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 NPAS4Q8IUM7 802 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 TTC39CQ8N584 583 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 LRRC52Q8N7C0 313 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 TFAP2BQ92481 460 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 ALG3Q92685 438 aa9.98□□□□□ -0.81
VPS25-205ENST00000590339 HLA-CQ95604 372 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms