RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TRPV2Q9Y5S1 764 aa10.98□□□□□ -0.65
VPS25-203ENST00000589520 ESYT3A0FGR9 886 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 GOLGA6L10A6NI86 522 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 TMEM88BA6NKF7 163 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 H3BQF6 201 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 AGPSO00116 658 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 O00370 1275 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 PIRO00625 290 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 POLR3GO15318 223 aaPredicted RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 CABYRO75952 493 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 CALCAP01258 141 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 C6orf222P0C671 652 aaPredicted RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 ECHS1P30084 290 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 SCNN1AP37088 669 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 PSMC4P43686 418 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 MARCKSL1P49006 195 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 NDST1P52848 882 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 CDH8P55286 799 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 PSMC1P62191 440 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 MRPS25P82663 173 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 MRPS6P82932 125 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 CALCOCO2Q13137 446 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 NOGQ13253 232 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 GNASQ5JWF2 1037 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 FBXO47Q5MNV8 452 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 C9orf57Q5W0N0 161 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 CCDC50Q8IVM0 306 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 GSPT2Q8IYD1 628 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 CRYBG2Q8N1P7 616 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 PCSK9Q8NBP7 692 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 FMO2Q99518 471 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 OSBPL8Q9BZF1 889 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 FOXP3Q9BZS1 431 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 SMYD3Q9H7B4 428 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 VPS18Q9P253 973 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 HESX1Q9UBX0 185 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 GTF2IRD1Q9UHL9 959 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 ADAM21Q9UKJ8 722 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 ABT1Q9ULW3 272 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 PIN4Q9Y237 131 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 DRG1Q9Y295 367 aaKnown RBP10.97□□□□□ -0.65
VPS25-203ENST00000589520 NR2E1Q9Y466 385 aa10.97□□□□□ -0.65
VPS25-203ENST00000589520 EVPLQ92817 2033 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 SMIM28A0A1B0GU29 152 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 GPR182O15218 404 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 RNF40O75150 1001 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 PPFIA2O75334 1257 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 RNF8O76064 485 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 RECQL4O94761 1208 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 FGFR4P22455 802 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 PSMA2P25787 234 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 CST5P28325 142 aaPredicted RBP10.96□□□□□ -0.65
VPS25-203ENST00000589520 LRPAP1P30533 357 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 PCK1P35558 622 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 SSR1P43307 286 aaKnown RBP10.96□□□□□ -0.65
VPS25-203ENST00000589520 RAP1GAPP47736 663 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 TAF6P49848 677 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 GUCY2FP51841 1108 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 TAS2R40P59535 323 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 RPL7AP62424 266 aaKnown RBP10.96□□□□□ -0.65
VPS25-203ENST00000589520 BEX3Q00994 111 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 TMEM62Q0P6H9 643 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.65
VPS25-203ENST00000589520 KLF1Q13351 362 aaPredicted RBP10.96□□□□□ -0.65
VPS25-203ENST00000589520 PDCLQ13371 301 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 PPP1R7Q15435 360 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 SV2CQ496J9 727 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 PTPN20Q4JDL3 420 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 SCARA3Q6AZY7 606 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 ARCQ7LC44 396 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 XYLT1Q86Y38 959 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 TOP6BLQ8N6T0 577 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 CCDC89Q8N998 374 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 FAM76AQ8TAV0 307 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 TNIP3Q96KP6 325 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 GDAP1L1Q96MZ0 367 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 MCEEQ96PE7 176 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 EIF2AQ9BY44 585 aaKnown RBP10.96□□□□□ -0.65
VPS25-203ENST00000589520 DCLK3Q9C098 648 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 ERVK-5Q9HDB9 667 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 USTQ9Y2C2 406 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 SNX9Q9Y5X1 595 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 SQORQ9Y6N5 450 aa10.96□□□□□ -0.65
VPS25-203ENST00000589520 KAT6AQ92794 2004 aa10.96□□□□□ -0.66
VPS25-203ENST00000589520 GOLGA6CA6NDK9 693 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 ZSCAN5CA6NGD5 496 aaPredicted RBP10.95□□□□□ -0.66
VPS25-203ENST00000589520 KPNA7A9QM74 516 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 M0QYV0 167 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 CAND2O75155 1236 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 RPS6KA5O75582 802 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 GNRH1P01148 92 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 ERBB2P04626 1255 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 FAM153BP0C7A2 387 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 GOLGA6DP0CG33 693 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 SKIP12755 728 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 RDXP35241 583 aaKnown RBP10.95□□□□□ -0.66
VPS25-203ENST00000589520 ACADSBP45954 432 aa10.95□□□□□ -0.66
VPS25-203ENST00000589520 FLT3LGP49771 235 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms