RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 VAMP1P23763 118 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 ACTN2P35609 894 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 ARL2P36404 184 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GCLMP48507 274 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 LMAN1P49257 510 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 AP3M2P53677 418 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 POLGP54098 1239 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 NKX3-2P78367 333 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PRKCEQ02156 737 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SP4Q02446 784 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GCNT1Q02742 428 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GUCY2DQ02846 1103 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 STRN3Q13033 797 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 DHX34Q14147 1143 aaKnown RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 TFDP1Q14186 410 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SNX17Q15036 470 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FSCN1Q16658 493 aaKnown RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 UGCGQ16739 394 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 ARHGAP44Q17R89 818 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 TRIM60Q495X7 471 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 ARSJQ5FYB0 599 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 EMC10Q5UCC4 262 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GJB7Q6PEY0 223 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 XKR5Q6UX68 686 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 CXCL17Q6UXB2 119 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SLC39A5Q6ZMH5 540 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FAM43BQ6ZT52 329 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 CROCCP2Q86T23 111 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 RNF180Q86T96 592 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 KSR1Q8IVT5 923 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 CD302Q8IX05 232 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GPD1LQ8N335 351 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 NME8Q8N427 588 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 METTL13Q8N6R0 699 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FBXL13Q8NEE6 735 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 OR6J1Q8NGC5 347 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FAM76AQ8TAV0 307 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PARD3BQ8TEW8 1205 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 HDAC7Q8WUI4 952 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 AFG1LQ8WV93 481 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SHC3Q92529 594 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 MS4A14Q96JA4 679 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PSMB7Q99436 277 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PCYT2Q99447 389 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 CBWD1Q9BRT8 395 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 KATNAL1Q9BW62 490 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SEZ6LQ9BYH1 1024 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 TMEM117Q9H0C3 514 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 RAB17Q9H0T7 212 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 WNT8AQ9H1J5 351 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 PCIF1Q9H4Z3 704 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 RUBCNLQ9H714 662 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 FAM204AQ9H8W3 233 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SUGCTQ9HAC7 445 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GPAMQ9HCL2 828 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 POLD4Q9HCU8 107 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 C11orf16Q9NQ32 467 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GOLGA6AQ9NYA3 693 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 LCMT1Q9UIC8 334 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 RASAL2Q9UJF2 1139 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 AJAP1Q9UKB5 411 aaPredicted RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 ATP11BQ9Y2G3 1177 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 UTP11Q9Y3A2 253 aaKnown RBP6.13□□□□□ -1.43
SDF2-206ENST00000587788 STYXL1Q9Y6J8 313 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 GRIN2DO15399 1336 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 ARID2Q68CP9 1835 aa6.13□□□□□ -1.43
SDF2-206ENST00000587788 SRRM3A6NNA2 597 aaPredicted RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 SOBPA7XYQ1 873 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 HMGB1P1B2RPK0 211 aaPredicted RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 HNRNPDLO14979 420 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 EFSO43281 561 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 SART1O43290 800 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 CYP1A2P05177 515 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 COL1A2P08123 1366 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 GLI1P08151 1106 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 MYBL2P10244 700 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 HSPA9P38646 679 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 NAMPTP43490 491 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 PDE6CP51160 858 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 DRG2P55039 364 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 PTENP60484 403 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 DLG4P78352 724 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 SLC7A5Q01650 507 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 CDR2Q01850 454 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 POU5F1Q01860 360 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 PTSQ03393 145 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 CYP24A1Q07973 514 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 PRPF4BQ13523 1007 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 PSMD6Q15008 389 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 PLCB4Q15147 1175 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 PCBP1Q15365 356 aaKnown RBP eCLIP6.12□□□□□ -1.43
SDF2-206ENST00000587788 MTERF2Q49AM1 385 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 C1orf220Q5T0J3 134 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 TRIM72Q6ZMU5 477 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 MAEAQ7L5Y9 396 aa6.12□□□□□ -1.43
SDF2-206ENST00000587788 TRMT1LQ7Z2T5 733 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 RPUSD2Q8IZ73 545 aaKnown RBP6.12□□□□□ -1.43
SDF2-206ENST00000587788 IQCKQ8N0W5 287 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms