RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 VIPR2P41587 438 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 BIRC3Q13489 604 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 GRM2Q14416 872 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 VEPH1Q14D04 833 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 C1orf220Q5T0J3 134 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 ITIH5Q86UX2 942 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 ZSCAN18Q8TBC5 510 aaPredicted RBP20.4■□□□□ 0.86
TPM4-204ENST00000586499 SPATA18Q8TC71 538 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 SMARCD2Q92925 531 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 ELSPBP1Q96BH3 223 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 SYT15Q9BQS2 421 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 ATXN3LQ9H3M9 355 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 SLITRK6Q9H5Y7 841 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 ZFP14Q9HCL3 533 aa20.4■□□□□ 0.86
TPM4-204ENST00000586499 NXF1Q9UBU9 619 aaKnown RBP20.4■□□□□ 0.86
TPM4-204ENST00000586499 COL4A3Q01955 1670 aa20.39■□□□□ 0.86
TPM4-204ENST00000586499 NCANO14594 1321 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 GADD45BO75293 160 aaPredicted RBP20.39■□□□□ 0.85
TPM4-204ENST00000586499 AKAP3O75969 853 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 VNN1O95497 513 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 NR2F2P24468 414 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 CLCN5P51795 746 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 DDR2Q16832 855 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 FAM171BQ6P995 826 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 CCDC34Q96HJ3 373 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 MKNK1Q9BUB5 465 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 KCNH6Q9H252 994 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 IL21Q9HBE4 155 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 CRTAC1Q9NQ79 661 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 ARHGEF3Q9NR81 526 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 FRMD4BQ9Y2L6 1034 aa20.39■□□□□ 0.85
TPM4-204ENST00000586499 AOC1P19801 751 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 GNL1P36915 607 aaPredicted RBP20.38■□□□□ 0.85
TPM4-204ENST00000586499 CDH8P55286 799 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 TNNC1P63316 161 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 CYP4F8P98187 520 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 TCF15Q12870 199 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 NCOA4Q13772 614 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 TAF12Q16514 161 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 VITQ6UXI7 678 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 SPATA2LQ8IUW3 424 aaPredicted RBP20.38■□□□□ 0.85
TPM4-204ENST00000586499 OR6B3Q8NGW1 331 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 TMC2Q8TDI7 906 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 RSPRY1Q96DX4 576 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 EEF2KMTQ96G04 330 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 TBC1D17Q9HA65 648 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 CDH9Q9ULB4 789 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 MAGED2Q9UNF1 606 aaPredicted RBP20.38■□□□□ 0.85
TPM4-204ENST00000586499 PCDHA5Q9Y5H7 936 aa20.38■□□□□ 0.85
TPM4-204ENST00000586499 TACC1O75410 805 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 STAU1O95793 577 aaKnown RBP20.37■□□□□ 0.85
TPM4-204ENST00000586499 HMGA1P17096 107 aaKnown RBP20.37■□□□□ 0.85
TPM4-204ENST00000586499 ATICP31939 592 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 PRCPP42785 496 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 AP3M2P53677 418 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 ADAM9Q13443 819 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 NFIL3Q16649 462 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 ZCWPW2Q504Y3 356 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 SLC44A4Q53GD3 710 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 GPR158Q5T848 1215 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 MYLPFQ96A32 169 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 SYAP1Q96A49 352 aaPredicted RBP20.37■□□□□ 0.85
TPM4-204ENST00000586499 TIGD1Q96MW7 591 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 GPR88Q9GZN0 384 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 SNX25Q9H3E2 840 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 DPEP3Q9H4B8 488 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 ABCB6Q9NP58 842 aa20.37■□□□□ 0.85
TPM4-204ENST00000586499 CLSTN1O94985 981 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 RAP1GAPP47736 663 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 VAMP7P51809 220 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 ZNF699Q32M78 642 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 ZACNQ401N2 412 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 CFAP221Q4G0U5 840 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 ISM2Q6H9L7 571 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 SV2AQ7L0J3 742 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 TMEM150AQ86TG1 271 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 ARID3BQ8IVW6 561 aaPredicted RBP20.36■□□□□ 0.85
TPM4-204ENST00000586499 SCN4BQ8IWT1 228 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 FAM186BQ8IYM0 893 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 SPATA20Q8TB22 786 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 SMARCE1Q969G3 411 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 GSDMAQ96QA5 445 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 TRMT61BQ9BVS5 477 aaKnown RBP20.36■□□□□ 0.85
TPM4-204ENST00000586499 FOXQ1Q9C009 403 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 SDCBP2Q9H190 292 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 SMYD3Q9H7B4 428 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 TRPV4Q9HBA0 871 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■■■■ 36.9
TPM4-204ENST00000586499 RMND1Q9NWS8 449 aa20.36■□□□□ 0.85
TPM4-204ENST00000586499 CIZ1Q9ULV3 898 aaPredicted RBP20.36■□□□□ 0.85
TPM4-204ENST00000586499 HEPACAM2A8MVW5 462 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 FGF19O95750 216 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 TRIM49P0CI25 452 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 TRIM49CP0CI26 452 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 RFX1P22670 979 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 BDNFP23560 247 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 GDI1P31150 447 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 RPL10AP62906 217 aaKnown RBP20.35■□□□□ 0.85
TPM4-204ENST00000586499 CYP27A1Q02318 531 aa20.35■□□□□ 0.85
TPM4-204ENST00000586499 NHLH1Q02575 133 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms