RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 FKBP3Q00688 224 aaKnown RBP21.53■■□□□ 1.04
SS18-218ENST00000581021 MGAT5BQ3V5L5 792 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 SPPL2BQ8TCT7 592 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 GPR152Q8TDT2 470 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 C2orf15Q8WU43 125 aaKnown RBP21.53■■□□□ 1.04
SS18-218ENST00000581021 NELFBQ8WX92 580 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 FGF14Q92915 247 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 ZNF512Q96ME7 567 aaPredicted RBP21.53■■□□□ 1.04
SS18-218ENST00000581021 PCDHB5Q9Y5E4 795 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 NARSO43776 548 aaKnown RBP21.52■■□□□ 1.04
SS18-218ENST00000581021 GPR37L1O60883 481 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 EPB41P11171 864 aaKnown RBP21.52■■□□□ 1.04
SS18-218ENST00000581021 CYP2F1P24903 491 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 PIK3CAP42336 1068 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 ASPAP45381 313 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 ALDH1A3P47895 512 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 EPHB3P54753 998 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 SMARCB1Q12824 385 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 PLD1Q13393 1074 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 ZNF667Q5HYK9 610 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 SDHAF4Q5VUM1 108 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 PARM1Q6UWI2 310 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 SHKBP1Q8TBC3 707 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 SEMA4DQ92854 862 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 PSMG2Q969U7 264 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 MYLPFQ96A32 169 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 MED15Q96RN5 788 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 LRFN3Q9BTN0 628 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 C1QTNF1Q9BXJ1 281 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 ASAH2Q9NR71 780 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 CDH9Q9ULB4 789 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 NUMBLQ9Y6R0 609 aa21.52■■□□□ 1.04
SS18-218ENST00000581021 MYL4P12829 197 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 STX17P56962 302 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 STIM1Q13586 685 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 MTMR3Q13615 1198 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 NFE2Q16621 373 aaPredicted RBP21.51■■□□□ 1.03
SS18-218ENST00000581021 TMEM31Q5JXX7 168 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 IQCEQ6IPM2 695 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 TRIM67Q6ZTA4 783 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 PDZD4Q76G19 769 aaPredicted RBP21.51■■□□□ 1.03
SS18-218ENST00000581021 DNAJB7Q7Z6W7 309 aaPredicted RBP21.51■■□□□ 1.03
SS18-218ENST00000581021 ELMOD1Q8N336 334 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 GPT2Q8TD30 523 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 GIPC2Q8TF65 315 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 MCRS1Q96EZ8 462 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 ASIC4Q96FT7 647 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 ZSWIM3Q96MP5 696 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 TMEM8AQ9HCN3 771 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 ABCB6Q9NP58 842 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 HMGXB4Q9UGU5 601 aa21.51■■□□□ 1.03
SS18-218ENST00000581021 GNL1P36915 607 aaPredicted RBP21.5■■□□□ 1.03
SS18-218ENST00000581021 TUFMP49411 452 aaKnown RBP21.5■■□□□ 1.03
SS18-218ENST00000581021 TEAD2Q15562 447 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 SGSM1Q2NKQ1 1148 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 CFAP221Q4G0U5 840 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 CBWD6Q4V339 395 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 CBWD3Q5JTY5 395 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 CBWD5Q5RIA9 395 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 STXBP5Q5T5C0 1151 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 GAREM2Q75VX8 874 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 TRIML1Q8N9V2 468 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 OR6B3Q8NGW1 331 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 PCED1BQ96HM7 432 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 SNX25Q9H3E2 840 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 IL21Q9HBE4 155 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 TMEM30AQ9NV96 361 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 IGSF9Q9P2J2 1179 aa21.5■■□□□ 1.03
SS18-218ENST00000581021 ZFP37Q9Y6Q3 630 aaPredicted RBP21.5■■□□□ 1.03
SS18-218ENST00000581021 A0A1W2PRU2 124 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 FAM163BP0C2L3 166 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 HMGA1P17096 107 aaKnown RBP21.49■■□□□ 1.03
SS18-218ENST00000581021 FCARP24071 287 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 GTF2H1P32780 548 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 NOP14P78316 857 aaKnown RBP21.49■■□□□ 1.03
SS18-218ENST00000581021 SIGLEC14Q08ET2 396 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 PAK1Q13153 545 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 TDGQ13569 410 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 DDR2Q16832 855 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
SS18-218ENST00000581021 MDH1BQ5I0G3 518 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 CYP4A22Q5TCH4 519 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 FOXR2Q6PJQ5 311 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 HFE2Q6ZVN8 426 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 SLC44A3Q8N4M1 653 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 MYCBPAPQ8TBZ2 947 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 TAF4BQ92750 862 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 SLC35C1Q96A29 364 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 NCANO14594 1321 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 PTPRDP23468 1912 aa21.49■■□□□ 1.03
SS18-218ENST00000581021 TMEM221A6NGB7 291 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 M0R296 226 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 MICAL2O94851 1124 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 CLSTN1O94985 981 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 PDGFBP01127 241 aaPredicted RBP21.48■■□□□ 1.03
SS18-218ENST00000581021 PPP1R2P41236 205 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 MXI1P50539 228 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 CACNA2D1P54289 1103 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 ORC1Q13415 861 aa21.48■■□□□ 1.03
SS18-218ENST00000581021 FAM78AQ5JUQ0 283 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms