RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 GNL1P36915 607 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ADAM9Q13443 819 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 NCOA4Q13772 614 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 GRM2Q14416 872 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 DDR2Q16832 855 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 TDRD10Q5VZ19 366 aaKnown RBP17.8■□□□□ 0.44
SREBF1-219ENST00000580540 TMEM105Q8N8V8 129 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 STKLD1Q8NE28 680 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ZSCAN18Q8TBC5 510 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-219ENST00000580540 SMARCD2Q92925 531 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 SMARCE1Q969G3 411 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 SYAP1Q96A49 352 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ELSPBP1Q96BH3 223 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ELMO3Q96BJ8 720 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ASB16Q96NS5 453 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 GCNAQ96QF7 691 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ARHGEF3Q9NR81 526 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 CDH9Q9ULB4 789 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 MAGED2Q9UNF1 606 aaPredicted RBP17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ZNF318Q5VUA4 2279 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 GADD45BO75293 160 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-219ENST00000580540 FGF19O95750 216 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 C4BPAP04003 597 aaKnown RBP17.79■□□□□ 0.44
SREBF1-219ENST00000580540 KRT13P13646 458 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 NPR3P17342 541 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 ATICP31939 592 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 VIPR2P41587 438 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 ZNF699Q32M78 642 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 ARHGAP15Q53QZ3 475 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 STXBP5Q5T5C0 1151 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 GAREM2Q75VX8 874 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 SCN4BQ8IWT1 228 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 FAM186BQ8IYM0 893 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 TMC2Q8TDI7 906 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 GPR88Q9GZN0 384 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 TBC1D17Q9HA65 648 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 MAGEC2Q9UBF1 373 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-219ENST00000580540 ARIH1Q9Y4X5 557 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-219ENST00000580540 PCDHA5Q9Y5H7 936 aa17.79■□□□□ 0.44
SREBF1-219ENST00000580540 PI15O43692 258 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
SREBF1-219ENST00000580540 AKAP3O75969 853 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 FCARP24071 287 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 CLCN5P51795 746 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 VAMP7P51809 220 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 RPL10AP62906 217 aaKnown RBP17.78■□□□□ 0.44
SREBF1-219ENST00000580540 CYP4F8P98187 520 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 CYP27A1Q02318 531 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 ZNF667Q5HYK9 610 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 CWF19L1Q69YN2 538 aaKnown RBP17.78■□□□□ 0.44
SREBF1-219ENST00000580540 ISM2Q6H9L7 571 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 SCARA5Q6ZMJ2 495 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 C4orf50Q6ZRC1 276 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 LIMS2Q7Z4I7 341 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 PRSS33Q8NF86 280 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 TMEM174Q8WUU8 243 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 MYLPFQ96A32 169 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 EEF2KMTQ96G04 330 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 TIGD1Q96MW7 591 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 GSDMAQ96QA5 445 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 PKMYT1Q99640 499 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 XYLT2Q9H1B5 865 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 KCNH6Q9H252 994 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 MMRN2Q9H8L6 949 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 BRD9Q9H8M2 597 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 CRTAC1Q9NQ79 661 aa17.78■□□□□ 0.44
SREBF1-219ENST00000580540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.78■□□□□ 0.44
SREBF1-219ENST00000580540 A8MXQ7 604 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 TACC1O75410 805 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 VNN1O95497 513 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 TRIM49P0CI25 452 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 TRIM49CP0CI26 452 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 CDC25CP30307 473 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 PSMC2P35998 433 aaKnown RBP17.77■□□□□ 0.44
SREBF1-219ENST00000580540 ANP32AP39687 249 aaKnown RBP17.77■□□□□ 0.44
SREBF1-219ENST00000580540 PLA2G5P39877 138 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 PRCPP42785 496 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 RAP1GAPP47736 663 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 CDH8P55286 799 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 CLDN10P78369 228 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 PFKPQ01813 784 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 NFIL3Q16649 462 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 SLC44A4Q53GD3 710 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-219ENST00000580540 FAM171BQ6P995 826 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 SV2AQ7L0J3 742 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 PRRX2Q99811 253 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 TRMT61BQ9BVS5 477 aaKnown RBP17.77■□□□□ 0.44
SREBF1-219ENST00000580540 SMYD3Q9H7B4 428 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 ABCB6Q9NP58 842 aa17.77■□□□□ 0.44
SREBF1-219ENST00000580540 MUC6Q6W4X9 2439 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 HEPACAM2A8MVW5 462 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 DPYSL4O14531 572 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 CETN3O15182 167 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
SREBF1-219ENST00000580540 CSH1P0DML2 217 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 CSH2P0DML3 217 aa17.76■□□□□ 0.43
SREBF1-219ENST00000580540 AOC1P19801 751 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms