RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 SMC2O95347 1197 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 RPL13P26373 211 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GABRR2P28476 465 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 CLCN5P51795 746 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 MYL6P60660 151 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 PSMC1P62191 440 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GPC5P78333 572 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 DLG4P78352 724 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 PFKPQ01813 784 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 NCOA4Q13772 614 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 ZNF699Q32M78 642 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 CFAP221Q4G0U5 840 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 TANGO2Q6ICL3 276 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GAREM2Q75VX8 874 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 SPATA2LQ8IUW3 424 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 SMYD4Q8IYR2 804 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 TMEM105Q8N8V8 129 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 ZSCAN18Q8TBC5 510 aaPredicted RBP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GIPC2Q8TF65 315 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 SMARCD2Q92925 531 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GSDMAQ96QA5 445 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GCNAQ96QF7 691 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 PI4K2AQ9BTU6 479 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GPR88Q9GZN0 384 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 XYLT2Q9H1B5 865 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 ZFP14Q9HCL3 533 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 GTF3C4Q9UKN8 822 aa11.7□□□□□ -0.54
PPP4R1-208ENST00000578178 CACNA1HO95180 2353 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 MIA3Q5JRA6 1907 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 MYBPHLA2RUH7 354 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 KINO60870 393 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 AKAP3O75969 853 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 C4BPAP04003 597 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 CSH1P0DML2 217 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 CSH2P0DML3 217 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 NPR3P17342 541 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 AOC1P19801 751 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 RFX1P22670 979 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 CDC25CP30307 473 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 GPR15P49685 360 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 VAMP7P51809 220 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 NUBP1P53384 320 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 RPL10AP62906 217 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 ENPEPQ07075 957 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 TAF12Q16514 161 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 EDRF1Q3B7T1 1238 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 ZACNQ401N2 412 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 ARHGAP15Q53QZ3 475 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 COBLL1Q53SF7 1204 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 STXBP5Q5T5C0 1151 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 IER5LQ5T953 404 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 ZNF658Q5TYW1 1059 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 FAM171BQ6P995 826 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 C4orf50Q6ZRC1 276 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 INTS8Q75QN2 995 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 PRSS33Q8NF86 280 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 SPATA20Q8TB22 786 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 DEPDC1BQ8WUY9 529 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 SMARCE1Q969G3 411 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 MYLPFQ96A32 169 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 FAM122AQ96E09 287 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 ZSWIM3Q96MP5 696 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 PLA2G2FQ9BZM2 168 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 SNX25Q9H3E2 840 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 ATXN3LQ9H3M9 355 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 TBC1D17Q9HA65 648 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 TRPV4Q9HBA0 871 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 CRTAC1Q9NQ79 661 aa11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 NXF1Q9UBU9 619 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-208ENST00000578178 GREB1Q4ZG55 1949 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 TICRRQ7Z2Z1 1910 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 KIF26AQ9ULI4 1882 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 IKBKBO14920 756 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 ATP2C2O75185 946 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 VNN1O95497 513 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 FAM163BP0C2L3 166 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 KRT13P13646 458 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 CYP2F1P24903 491 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 LMO2P25791 158 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 PSMC2P35998 433 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 PIK3CAP42336 1068 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 MAGEA11P43364 429 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 PTPN5P54829 565 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 CYP4F8P98187 520 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 MLF2Q15773 248 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 ZNF667Q5HYK9 610 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 GPR158Q5T848 1215 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 PHLDB3Q6NSJ2 640 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 VITQ6UXI7 678 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 SV2AQ7L0J3 742 aa11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 ELOA2Q8IYF1 753 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-208ENST00000578178 OR6B3Q8NGW1 331 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms