RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LRRIQ4A6NIV6 560 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 HGSO14964 777 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 RARAP10276 462 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ACRP10323 421 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CHRNB2P17787 502 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ACOT2P49753 483 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 GTF2BQ00403 316 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 FMO1Q01740 532 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 TNP2Q05952 138 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ADCY1Q08828 1119 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 PGM5Q15124 567 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CLUL1Q15846 466 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SPRED3Q2MJR0 410 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 C1orf220Q5T0J3 134 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 GKAP1Q5VSY0 366 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 LLGL2Q6P1M3 1020 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SYT11Q9BT88 431 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 TCHPQ9BT92 498 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 TRIM7Q9C029 511 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 WNT8AQ9H1J5 351 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 PABPC3Q9H361 631 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 LIN7BQ9HAP6 207 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CASS4Q9NQ75 786 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 INTS9Q9NV88 658 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 ANKFY1Q9P2R3 1169 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 PCDHA10Q9Y5I2 948 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SCN9AQ15858 1988 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CNTNAP1P78357 1384 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 PODXLO00592 558 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 RASGRF2O14827 1237 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ZBTB48P10074 688 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 CHN1P15882 459 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ADSSP30520 456 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 NF2P35240 595 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 COILP38432 576 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 GTF2A1P52655 376 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 RPS26P62854 115 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 IFI35P80217 286 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 DAB2IPQ5VWQ8 1189 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CIAPIN1Q6FI81 312 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SNRNP48Q6IEG0 339 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 C11orf63Q6NUN7 778 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 TTC27Q6P3X3 843 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 B3GNT9Q6UX72 402 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 LSRQ86X29 649 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 C4orf19Q8IY42 314 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 FAM71AQ8IYT1 594 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 PGBD3Q8N328 593 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ANKRD42Q8N9B4 389 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 BSNDQ8WZ55 320 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ATP6V0A1Q93050 837 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 C11orf70Q9BRQ4 267 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 TMEM8AQ9HCN3 771 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 MLXIPLQ9NP71 852 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 GTF3C4Q9UKN8 822 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 TTC7AQ9ULT0 858 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 MYH11P35749 1972 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SMAD7O15105 426 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 PPFIA2O75334 1257 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 GZMAP12544 262 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SCP2P22307 547 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ADCY8P40145 1251 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 PIK3CAP42336 1068 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 NSFP46459 744 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 CDR2Q01850 454 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 POU5F1Q01860 360 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 CLCQ05315 142 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 LRRC14Q15048 493 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 DALRD3Q5D0E6 543 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 SPOPLQ6IQ16 392 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 ANO5Q75V66 913 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 GSTA5Q7RTV2 222 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 VN1R5Q7Z5H4 357 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 NLRP8Q86W28 1048 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SPATS2Q86XZ4 545 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TMEM161BQ8NDZ6 487 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SVIPQ8NHG7 77 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 OLIG1Q8TAK6 271 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SHC3Q92529 594 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 LPAR1Q92633 364 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 KAT2BQ92831 832 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TMEM143Q96AN5 459 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 XPO6Q96QU8 1125 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 MOV10L1Q9BXT6 1211 aaKnown RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 MUC3BQ9H195 1237 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SLC38A10Q9HBR0 1119 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 MYOZ2Q9NPC6 264 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 PXMP2Q9NR77 195 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 RIPK3Q9Y572 518 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 TNFRSF10AO00220 468 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 FAM157BP0CG42 384 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 RRM1P23921 792 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 CCND2P30279 289 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 SFNP31947 248 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 CDKN1CP49918 316 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 POLGP54098 1239 aaPredicted RBP5.68□□□□□ -1.5
VAPA-203ENST00000577539 KRT17Q04695 432 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 STRN3Q13033 797 aa5.68□□□□□ -1.5
VAPA-203ENST00000577539 BYSLQ13895 437 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms